Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0504 ATGGGACTTGTTTTTACCAAATGGGCATGTGCATTCTTACTTTGTTGTTGGCTCATCACCTCTGCAGTACATTCAGTGGAGGGGTTACATAGGGGTTCTAAAGTGAGAGGAGTGAACTTAGGAGGGTGGCTGGTCATTGAAGGTTGGATTAAGCCTTCTTTGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGACAGAGGTGCAATTTAAGTCAGTCACATTGCAGAAGTATATATCTGCAGAGAATGGGGGAGGAACGAATGTTACTGTTGACAGGGATGTACCATCTTCGTGGGAAACCTTCAAGTTATGGAGGCTATCAGAATCTGAATTTCAATTCCGTACGTCCCAAGGTCAATTTCTTACATGTGATGGTGATGGCTGCTCTGTTTCAGCAACAGCAAAGTCACCTTCAACATCAGAAACATACGAAATTGAACGGAATGAGGGAAACAGAATTCATATGAGGAAAAAGAATGGGGCCTATCTGCAGGCTACAACAGAAGGTCAGCTTACAGCAAACTACCCAGGTTCACCTGGATGGGATGATAATGCTGCTACATTTGACATGACTATTGTATCAAATCTTTTACATGGAGATTACCAGCTAGCAAATGGATATGGGCATGATCGGGCAAAAGATGTTCTTAGGAGGCATAGAAATAGCTTTATCACCATAGAGGATTTCAAATTTCTATATAAACATGGAATAAATACTGTGAGGATTCCAGTTGGTTGGTGGATTGCTTATGATCCTGATCCTCCAGATCCGTTTATTGGAGGAAGTCTTGATGCTCTAGATAACGCATTTTCATGGGCAGAAGAATATGATATAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGGATGGAACATAGTGCAAGCAGAGATGGATTTACGGGTTGGCCCAATTCTACAGATTACATTTCCGAGACATTGACTGTTATTGAATTTTTAGCTTCTAGATATGCTGGATTTCCTGCTTTGCTGGGAATTGAGCTTCTAAATGAACCATCTGCTGCTACAGTTCCATTAGATACTTTGATGTCATATTACAAGCAGGGCTACGAAATTGTTCGAAAACATTCGTCGACAGCTTATGTAATAATGTGCCAAAGAATTGGCATTGCAGATCCTTTGGAACTTTATCAAGTCAACATAGGATCTCAGAACACAGTTTTGGATTTGCATTTCTACAATCTCTTTGACACATTTTTTGTTAATATGAGTGCTGGGGATAATATCCAATACATATACAATAGCCGGGAAGGTCAACTGAAGGCCTTGAACAACTCAAATGGCCCACTTGTTTTTATTGGAGAGTGGGTGAATGAGTGGAATGTTACAAGCGGATCCCAAAAAGATTATCAGGAATTTGGAAATGCACAGTTAGAAGTCTACAATGCAGCTTCCTTTGGATGGGCTTACTGGACCCTAAAAAATGACAGGATGCACTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGAAAATCACCCAGCAAACAGAATCTTTACATTTTAGGATTGATAGGATTGGCATGCACCTGGTTTTGTCTCCTTCCCTTTTTGTGA 1602 0.4057 MGLVFTKWACAFLLCCWLITSAVHSVEGLHRGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQFKSVTLQKYISAENGGGTNVTVDRDVPSSWETFKLWRLSESEFQFRTSQGQFLTCDGDGCSVSATAKSPSTSETYEIERNEGNRIHMRKKNGAYLQATTEGQLTANYPGSPGWDDNAATFDMTIVSNLLHGDYQLANGYGHDRAKDVLRRHRNSFITIEDFKFLYKHGINTVRIPVGWWIAYDPDPPDPFIGGSLDALDNAFSWAEEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPNSTDYISETLTVIEFLASRYAGFPALLGIELLNEPSAATVPLDTLMSYYKQGYEIVRKHSSTAYVIMCQRIGIADPLELYQVNIGSQNTVLDLHFYNLFDTFFVNMSAGDNIQYIYNSREGQLKALNNSNGPLVFIGEWVNEWNVTSGSQKDYQEFGNAQLEVYNAASFGWAYWTLKNDRMHWDFEWNIRNNYLQLGKSPSKQNLYILGLIGLACTWFCLLPFL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0504 533 PANTHER FASCIN 15 511 IPR010431 GO:0007015|GO:0051015
Dod04g0504 533 SUPERFAMILY (Trans)glycosidases 34 506 IPR017853 -
Dod04g0504 533 Gene3D - 69 193 - -
Dod04g0504 533 PANTHER - 15 511 - -
Dod04g0504 533 Pfam Cellulase (glycosyl hydrolase family 5) 226 488 IPR001547 GO:0004553|GO:0071704
Dod04g0504 533 Pfam Fascin domain 89 177 IPR022768 GO:0030674|GO:0051015
Dod04g0504 533 ProSitePatterns Glycosyl hydrolases family 5 signature. 336 345 IPR018087 GO:0004553|GO:0005975
Dod04g0504 533 SUPERFAMILY Actin-crosslinking proteins 69 181 IPR008999 -
Dod04g0504 533 Gene3D Glycosidases 194 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0504 Dod-Chr4 7241233 7246875 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0504 - - gmx:100809472 981.859