Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0493 ATGTTGTTGTTGAAACAGATGGCTCGTACAAAGCAAACTGCTCGTAAGTCAACTGGTGGAAAGGCTCCTAGGAAGCAACTTGCCACAAAGGCTGCTCGTAAGTCTGCCCCAACTACTGGTGGTGTGAAGAAGCCCCATCGTTATCGCCCCGGAACTGTTGCTCTTCGTGAAATTAGGAAATACCAGAAGAGTACTGAGCTCCTTATCAGGAAGCTCCCATTCCAGAGGCTGGTTCGTGAAATTGCTCAGGACTTCAAGACTGATCTTCGTTTCCAGAGCCATGCTGTCCTTGCATTGCAAGAAGCTGCTGAGGCATATCTCGTTGGGCTGTTTGAGGACACCAACTTGTGCGCCATTCATGCCAAGCGTGTGACTATCATGCCCAAGGATATCCAGCTGGCTAGAAGGATCCGTGGTGAGCGTGCTTGA 429 0.5012 MLLLKQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0493 142 ProSitePatterns Histone H3 signature 1. 21 27 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 Pfam Core histone H2A/H2B/H3/H4 7 138 IPR007125 GO:0003677
Dod04g0493 142 Gene3D Histone, subunit A 8 142 IPR009072 GO:0046982
Dod04g0493 142 PRINTS Histone H3 signature 9 23 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PRINTS Histone H3 signature 104 120 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PRINTS Histone H3 signature 86 104 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PRINTS Histone H3 signature 64 81 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PRINTS Histone H3 signature 40 61 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PRINTS Histone H3 signature 120 141 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PRINTS Histone H3 signature 23 37 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PANTHER - 4 142 - -
Dod04g0493 142 SUPERFAMILY Histone-fold 8 139 IPR009072 GO:0046982
Dod04g0493 142 SMART h35 40 142 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 MobiDBLite consensus disorder prediction 1 49 - -
Dod04g0493 142 ProSitePatterns Histone H3 signature 2. 73 81 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod04g0493 142 PANTHER HISTONE H3 4 142 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0493 Dod-Chr4 6961008 6962823 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0493 K11253 - dcr:108205287 270.396