Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0471 ATGGGGAAGAAGCCATCTTTGCGTAGCAAAGCTACTCAGTTTGTATCTGTCCTCCTTAACCCAATATCTGACTCTGACACTCACAAACCTTCCAAACACCCTTCACCTCCACCTCCTTCTGAAGAAGTAGGTGAATCAGAAAAAAAGAGTGAATCAAAGACAACTGATGAAGAGGGTAACAATGATCTAGTTGATGGGCCTGATACTTCATCCTTCACTGCATTCCTCTATTCTCTGTTGTCTTCCTCAGATGCTGCTGGAGATAATGCAAAACCACATGATCACAGTGATGGTAATAATAAAGCTGCAGGAGGTGATGATGACAACCCTTTACCAGGCACATCAATGAAGGAAAATAATGGTGGAAAGAGAAGTTTGCTCTCTAGAAGTAAGCAGTCACTCGGTAGAGCTATTCGCCGAGCCGCCAGGATCGGTGGATTGAGCAACCGTGATCGCAAGGATAATAGTTCTGAGATGAATGCTGATGATGGGAATGGTTCTGGATTGTGTGATGGTGTTGGGACGAGGCATGTTGAGCCTGTGAAAGAGTCACTGCCTGGGGCTTTCGTTGATAATATGCCTGAAATTTCTGAACCTTCAATGCTGCTTTCAGATAGTATGAGGAATGCTCTCTGTGCTTCTCTTCCAGCTCTTGTTCATGGAAGGAAATGGCTGTTGCTGTACAGCACTTGGAGGAATGGTATATCACTTTCAACGCTTTACCGGAAAAGCATGATTTGGCCTGGATTGAGTTTACTGGTTGTGGGAGACCGAAAAGGAGCAGTGTTTGGCAGCTTGGTTGAAGCACCTCTCAGACCATCCAGCAAGAGAAAATACCAGGGAAGCAACAATACATTTGTTTTCACAAATACCCCTGGTCATCCTGTTATATATCGTCCAACAGGGCTAAACCGCTACTACACACTATGCAACACTGACTTTTTAGCGATCGGAGGGGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAATGGCTCAAGTGCTGTATCAGAAACTTATGGAAATCCTTGCCTTGCAAATTCTCAAGACTTTGAAGTGAAGGAAGTAGAGTTGTGGGGCTTTGTATATGCTTCAAAATATGAGGAAGTACTTGCATTTAGCAGAACAGAGGCACCTGGCATTTGTCGATGGTAA 1161 0.4419 MGKKPSLRSKATQFVSVLLNPISDSDTHKPSKHPSPPPPSEEVGESEKKSESKTTDEEGNNDLVDGPDTSSFTAFLYSLLSSSDAAGDNAKPHDHSDGNNKAAGGDDDNPLPGTSMKENNGGKRSLLSRSKQSLGRAIRRAARIGGLSNRDRKDNSSEMNADDGNGSGLCDGVGTRHVEPVKESLPGAFVDNMPEISEPSMLLSDSMRNALCASLPALVHGRKWLLLYSTWRNGISLSTLYRKSMIWPGLSLLVVGDRKGAVFGSLVEAPLRPSSKRKYQGSNNTFVFTNTPGHPVIYRPTGLNRYYTLCNTDFLAIGGGGHFALYLDGDLLNGSSAVSETYGNPCLANSQDFEVKEVELWGFVYASKYEEVLAFSRTEAPGICRW* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0471 386 MobiDBLite consensus disorder prediction 113 132 - -
Dod04g0471 386 SMART 109ultra 200 364 IPR006571 -
Dod04g0471 386 MobiDBLite consensus disorder prediction 145 159 - -
Dod04g0471 386 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 380 - -
Dod04g0471 386 ProSiteProfiles TLDc domain profile. 201 364 IPR006571 -
Dod04g0471 386 MobiDBLite consensus disorder prediction 84 170 - -
Dod04g0471 386 Pfam TLD 226 363 IPR006571 -
Dod04g0471 386 MobiDBLite consensus disorder prediction 42 60 - -
Dod04g0471 386 MobiDBLite consensus disorder prediction 1 70 - -
Dod04g0471 386 MobiDBLite consensus disorder prediction 9 25 - -
Dod04g0471 386 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 380 - -
Dod04g0471 386 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0471 Dod-Chr4 6676336 6680001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0471 223 371 EF-hand Containing Proteins AT5G06260 30.818 2.59e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0471 - - aip:107622578 537.724