Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0468 ATGGCTAGACTTTTCTACCATAAGCCCAAATTTGCAATTCTTGACGAGTGCACAAGTGCTGTCACTACTGATATGGAAGAACGGTTTTGTGCTAAAGTTCGCGCCATGGGAACATCATGCATTACCATATCACACCGTCCAGCATTAGTTGCATTCCATGATGTGGTTTTATCATTAGATGGTGAAGGAGGATGGAGTGTTCATAATAGAAGGGAGAACTCTTCTACTGAAAGGGGGTTTGATACAATGAAGGCATCAGAGACAAAGCGACAGAGTGATGCAAAAGCAGTTCAACGTGCATTTTCCATGAACAAAAAGGATTCTGCATTCTCAAATTCAAAGGCACAGTCGTATATTGCAGAAGTGATATCATCATCTCCATCTATGAATCATACTATTTCACCGGCTGCTGTTCCCCAACTCTCTGTTAATACCAGGCTATTGCCATTGAGAATAGCTGCCATGTGCAAAGTATTGGTACCCACGGTCCTTGATAAACAGGGTGCACAACTGCTTGCTGTAGCTTTTCTTGTTGTTTCAAGAACATGGGTCTCAGATCGTATTGCATCGCTGAATGGCACCACCGTTAAGTTTGTCTTGGAGCAGGATAAAGCTGCCTTTATCCGGTTGATTGGTCTAAGTGTTCTCCAAAGTGCTGCATCTTCATTCATTGCACCTTCTATAAGACACTTGACTGCCAGGCTGGCCCTTGGGTGGCGGATTCGTTTGACACAGCATCTACTCAAGAACTACTTGAGAAACAATGCATTCTACAAGGTCTTCCACATGGCAAGCAAAAACATTGATGCAGATCAGAGGATAACTCATGACTTGGAGAAGTTAACAACAGACTTGTCTGGACTGGTCACTGGAATGGTAAAGCCGTCTGTGGATATTTTGTGGTTCACATGGAGAATGAAGCTGTTAACTGGTCAGAGGGGAGTTGCCATACTCTATACTTACATGTTACTTGGTCTGGGATTTCTAAGGACTGTTACTCCTGATTTTGGTGATTTAATAAGCCAAGAACAACAGCTTGAAGGAGCCTTTAGGTTCATGCATGAAAGACTCTGTACTCATGCCGAATCTGTTGCTTTCTTTGGAGGTGGTGCTCGAGAAAAAGTTATGGTTGAGTCAAGATTCAGAGATCTTCTCACCCACTCCAAGTACCTTCTAAAAAAGAAGTGGCTATTTGGTATATTGGATGATTTTATCACCAAGCAACTTCCTAATAATGTGACTTGGTTGCTGAGCTTATTGTATGCCATGGAACATAAGGGAGACCGTGCATCAACAAATACTCAGGGTGAGCTGGCACATGCATTGAGGTTCTTAGCATCTGTTGTTTCTCAAAGCTTTTTAGCTTTTGGTGACATTCTTGAACTGCATAGAAAGTTTGTAGAACTCTCTGGTGGTATTAATCGGATTTTTGAACTTGAAGAACTCCTGGATGCAGCTCAGTCTGGGACTATGATCAAAGATGGTATACCTCCAGTGAGGGATTCTCATTCTAAAGATGTTATTTGCTTTTCAAAGGTTGATATTGTAACCCCTACTCAGAAGATGTTGGCCAGGGAGCTGACATGTGACATTGAGCTTGGGGGAAGTCTGCTTGTTACTGGTCCAAATGGAAGTGGAAAAAGTTCCATTTTCAGAGTTCTTAGAGGACTTTGGCCAATTGCAAGTGGAAGACTCTCTGGACCACCTGAAGATGTGGATCAAGAGGCTGGATCTGGTTGTGGCATCTTCTATGTTCCTCAGCGGCCCTATACTTGCTTGGGAACCCTGCGGGATCAAATTATATACCCCCTGTCCCGTGAGGAAGCAGAATTCAGAGCATTGAATATCTACGGAAAAGGTAAAAATAATCTTGTCCCGGGAAATTTGTTGGATTCACAGTTGCAAGTTATCCTAGAGAATGTTCGGTTGAATTATCTTCTAGAAAGGGAGAAAAGTGGCTGGGATGCAAATCTAAACTGGGAAGACATTCTTTCTCTTGGAGAGCAGCAGAGGTTAGGCATGGCACGGTTGTTCTTCCATAAGCCCAAATTTGGTATCCTCGACGAGTGCACCAATGCCACTAGTGTTGATGTCGAAGAACACCTATATAGGCTTGCAAAGGATATGGGAATCACATTTGTTACTTCTTCACAACGTCCTGCTTTAATACCATTCCATTCCTTGGAACTACGGCTGATTGATGGTGAGGGTAATTGGGAGCTTCGTTTGATCAAGCAATGA 2241 0.4297 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHNRRENSSTERGFDTMKASETKRQSDAKAVQRAFSMNKKDSAFSNSKAQSYIAEVISSSPSMNHTISPAAVPQLSVNTRLLPLRIAAMCKVLVPTVLDKQGAQLLAVAFLVVSRTWVSDRIASLNGTTVKFVLEQDKAAFIRLIGLSVLQSAASSFIAPSIRHLTARLALGWRIRLTQHLLKNYLRNNAFYKVFHMASKNIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKLLTGQRGVAILYTYMLLGLGFLRTVTPDFGDLISQEQQLEGAFRFMHERLCTHAESVAFFGGGAREKVMVESRFRDLLTHSKYLLKKKWLFGILDDFITKQLPNNVTWLLSLLYAMEHKGDRASTNTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQSGTMIKDGIPPVRDSHSKDVICFSKVDIVTPTQKMLARELTCDIELGGSLLVTGPNGSGKSSIFRVLRGLWPIASGRLSGPPEDVDQEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAEFRALNIYGKGKNNLVPGNLLDSQLQVILENVRLNYLLEREKSGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEHLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRLIKQ* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0468 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 62 IPR027417 -
Dod04g0468 746 CDD ABCD_peroxisomal_ALDP 508 739 - -
Dod04g0468 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 744 IPR003439 GO:0005524
Dod04g0468 746 Pfam ABC transporter 526 692 IPR003439 GO:0005524
Dod04g0468 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 735 IPR027417 -
Dod04g0468 746 Gene3D - 500 736 IPR027417 -
Dod04g0468 746 Pfam ABC transporter transmembrane region 2 156 421 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod04g0468 746 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 2 746 - -
Dod04g0468 746 Gene3D - 1 120 IPR027417 -
Dod04g0468 746 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524
Dod04g0468 746 MobiDBLite consensus disorder prediction 68 91 - -
Dod04g0468 746 SUPERFAMILY ABC transporter transmembrane region 170 421 IPR036640 GO:0005524|GO:0016021
Dod04g0468 746 PANTHER ABC TRANSPORTER D FAMILY MEMBER 1 2 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0468 Dod-Chr4 6645834 6653772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0468 1 746 Acyl Lipid Metabolism Gene Families AT4G39850 75.000 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0468 K25819 - gmx:100813765 1339.71