Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0464 ATGGGGGACACTTCACCCGAAAGGAGGGGTTGTGGTTTTATGACCACATTATTTGGAAGGCGAAACCTTTGGTCATCACGCAAAACAATCTCTGCAACTTCTTGTACTGATGTCAAAGATTTTGGAAAGACATCAACCACCCATGATTCAAAAAGGCCACAAAGTGTTGTCTCTAATGATACCACAAATGCTTCATCTAGTTCTATCTCCAAGCCTCCACAAAATCCCCAAATCCCAACCCATGTTGTAAATGTAAACCTAAATCACCAAAGGAAGCAACAACAGAATGAAACAGCAATGGCAATGCCTTCATCAAGGGCAATAGGGACATCAAAGGTGTTACCTACACAAGGGTATGTCAATCAGGGGAAAAGGGTGCCAAAAGAAGTTGTTGGCATATCTGGTGAGCTTGAGAGCATGATCAATGATTACCAAAAATCCAATGGAAGCAGCAAGCTTGTTCGAGCTTCTTCGAGCAATGTGATGTTGTTTGGTAACTTAGGTAACCTTAGGCAAGGAGGAGAAGCAGGAGGAAACACTAGCTATCAATATGAAATGGATTACATGGTTGCTAATGGAGGGTACACGCATAACATGGTGGAAAATGCTAGTAATCGGAGTACAGAGGTTAGAAGTAGCAAACAAGAATCAGGTTCATTGTGCAGGGCTGTCTCTACTAGAATGGATCCTGAGAAATTGAAGATAATGGGCAATGAGGATTATAGGAATGGAAATTTTGCTGAGGCATTGGCTCTATATGATGCAGCTATTGCAATTGACCCCAATAAGGCTTCCTATAGGAGCAACAGAAGTGCAGCATTAACAGCTCTTGGTAGGATTTTGGAGGCTGTGTTTGAATGCAGAGAAGCCATTCGAATTGAGCCTCATTATCATAGAGCTCATCATCGATTGGGAAGTTTGTACTTTAGACTAGGAGAAACAGATAAGGCCTTGTATCATTATAAACAAGCAGGACCAGAGGCTGACCCTGATGAGATTGCTAAAGTGAAGAATCTTCAAGTCCATCTGCACAAGTGTACTGAGGCTCGTAGGTTAGGAGATTGCAACACACTACTCACAGAGACTAGCAAGGTTGTATCATCTGGTGTAGATTCTGCTCCACATATATTTTCATTACAAGTTGAAGCCCTATTAAAGCTTCATAGACATCAAGATGCAGACAACATAATGTCAAAGTGCCCAAATTTTGATGTCGATGAGTGTACCAAGTTCTTTGGACCTATTGGCAACGCAAATTTGTTGGTGACACGTGCTCGAGTTGATATAGCAGCTGGGAGGTTAGTGATGGTTCCTAGAACTAGAGTAGTTCTAGTAAAGTAG 1341 0.4191 MGDTSPERRGCGFMTTLFGRRNLWSSRKTISATSCTDVKDFGKTSTTHDSKRPQSVVSNDTTNASSSSISKPPQNPQIPTHVVNVNLNHQRKQQQNETAMAMPSSRAIGTSKVLPTQGYVNQGKRVPKEVVGISGELESMINDYQKSNGSSKLVRASSSNVMLFGNLGNLRQGGEAGGNTSYQYEMDYMVANGGYTHNMVENASNRSTEVRSSKQESGSLCRAVSTRMDPEKLKIMGNEDYRNGNFAEALALYDAAIAIDPNKASYRSNRSAALTALGRILEAVFECREAIRIEPHYHRAHHRLGSLYFRLGETDKALYHYKQAGPEADPDEIAKVKNLQVHLHKCTEARRLGDCNTLLTETSKVVSSGVDSAPHIFSLQVEALLKLHRHQDADNIMSKCPNFDVDECTKFFGPIGNANLLVTRARVDIAAGRLVMVPRTRVVLVK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0464 446 Pfam Tetratricopeptide repeat 300 330 IPR019734 GO:0005515
Dod04g0464 446 MobiDBLite consensus disorder prediction 48 79 - -
Dod04g0464 446 Pfam TPR repeat 237 278 - -
Dod04g0464 446 SUPERFAMILY TPR-like 230 404 IPR011990 GO:0005515
Dod04g0464 446 PANTHER OS01G0616333 PROTEIN 6 434 - -
Dod04g0464 446 Gene3D Tetratricopeptide repeat domain 228 427 IPR011990 GO:0005515
Dod04g0464 446 SMART tpr_5 230 263 IPR019734 GO:0005515
Dod04g0464 446 SMART tpr_5 298 331 IPR019734 GO:0005515
Dod04g0464 446 SMART tpr_5 264 297 IPR019734 GO:0005515
Dod04g0464 446 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 6 434 IPR044534 -
Dod04g0464 446 MobiDBLite consensus disorder prediction 38 79 - -
Dod04g0464 446 ProSiteProfiles TPR repeat profile. 230 263 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0464 Dod-Chr4 6525820 6527645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0464 243 339 Glycosyltransferase AT3G04240 30.928 4.01e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0464 - - lang:109326248 527.324