Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0450 ATGGAATCGGAGTCTCCACGATCCGAATCCGAAACGGACCCACTCTCGAGCCGATTCGGGTCCCTCAACGACCTCTGCCACGACCTCTCCTCCCTCCACGACCTCGCCACACGCGGCGCGTGGCGCTCCGTCATCGACAAGGTGTCACGCGCGAGGGCCCTCAACCTCCTCCAGAAGCCCCACGATCACATCACCTACCTCGCCTACAACGCCTTCGCCTTCGCCAAGCTCCGCCGCTTCAACGACGCCTCCGCCGAGCTCGACTCCATGGACGAGCTCGACACCCCTCACTACCGCTACGAAACCTACCCCAACCTCTACCCTAACCGCTCCGGTTCCATGATCCCCTTCTCCCTCCGCTGGCTCCACGCCTTAATCCCTATCAAATTAGGTCACAGATCCCAAGGCATCGATCGCTTGTACAATCTCCTCGATTTCGTTCGCCAGAGGATCCGCGACAAGGAGAATCGAAACCTCGAAGAATCACTTTCGGTTTGGAAGAAGAGGGAGGTTTTCGTTGTGAATTGCATAATCGGGAATCACTTGAGTCATAAGGAATTCGGTGTTTGTTTGAGCCTTCTGAAGGAGTTGCTATCGCGTGATTCCTCCGATCCGTTGCTGGTTTCGCAGTTAGGTTACGTTCAGTTGCAGATTGGGGATTTGGAAGGTGCGAAGGTTTCGTTTTCGAAGGTGGAGGGTTTGGTGAACGAAGGGAAGAGTAGTAATGGTTTGTTGAGTGAGGTTGAGATGAGGAACATTGTGAACAGGAACAAGGCTTTGGTGTATTTGGTGGGGAAGGATTATGTTTCTGCGGTGAGGGAGTATGAGGAGTGCATTGAGAGGGATGGTTCTGATGTTGTGGCTGTGAACAATAAGGCCTTGTGTTTGATGTATCTGAGGGACTTGTCTGATTCAATCAAGGTTCTTGAGAATGCTCTTGAGATGGTTCCTACTGTGGCACTCAATGAGACCCTTGTTGTTAATTTGTGTAGCATGTATGAGCTGGCTTATGTTAATCACTCTGATATTAAGAGGACGCTTAGCAATTGGATCGCTCGTGTTGCCCCTGATGACTTTGATGCGACGTGTACTCGAACGTGA 1101 0.5177 MESESPRSESETDPLSSRFGSLNDLCHDLSSLHDLATRGAWRSVIDKVSRARALNLLQKPHDHITYLAYNAFAFAKLRRFNDASAELDSMDELDTPHYRYETYPNLYPNRSGSMIPFSLRWLHALIPIKLGHRSQGIDRLYNLLDFVRQRIRDKENRNLEESLSVWKKREVFVVNCIIGNHLSHKEFGVCLSLLKELLSRDSSDPLLVSQLGYVQLQIGDLEGAKVSFSKVEGLVNEGKSSNGLLSEVEMRNIVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAVNNKALCLMYLRDLSDSIKVLENALEMVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDATCTRT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0450 366 SUPERFAMILY TPR-like 193 321 IPR011990 GO:0005515
Dod04g0450 366 Gene3D Tetratricopeptide repeat domain 174 348 IPR011990 GO:0005515
Dod04g0450 366 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 8 365 - -
Dod04g0450 366 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 8 365 - -
Dod04g0450 366 SMART tpr_5 286 319 IPR019734 GO:0005515
Dod04g0450 366 SMART tpr_5 205 238 IPR019734 GO:0005515
Dod04g0450 366 SMART tpr_5 252 285 IPR019734 GO:0005515
Dod04g0450 366 Coils Coil 137 157 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0450 K20309 - gmx:100779190 582.793