Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0449 ATGGGAGTTGGAGGCACTCTGGAGTACTTGTCTGATCTAATGGGCAGTGGCCACCACCATCACCATAAGAAGAAGAAGAAGCAATTACAGACCATAGAGCTGAAGGTGAGGATGGACTGTGATGGCTGTGAGCTTAAGGTCAAGAAGGCCCTCTCTTCATTAAATGGAGTGAAATCAGTGGAGATAAACAGGAAACAACAAAAAGTGACAGTAACTGGGTATGTGGAAGAAAACAAGGTACTAAAGAAAGCCAAGTCAACAGGGAAGAAGGCTGAGATTTGGCCTTATGTGCCTTACAACATGGTGGCTCATCCATATGCTGTTCCAGCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGGAGAGTGGACAACACTTCCACCATTGGAACCGTCAAAACATATGAAGACCCTTATATCACCATGTTCAGTGATGAAAACCCAAATGCTTGCTCTATCATGTAG 465 0.4452 MGVGGTLEYLSDLMGSGHHHHHKKKKKQLQTIELKVRMDCDGCELKVKKALSSLNGVKSVEINRKQQKVTVTGYVEENKVLKKAKSTGKKAEIWPYVPYNMVAHPYAVPAYDKKAPPGYVRRVDNTSTIGTVKTYEDPYITMFSDENPNACSIM* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0449 154 Pfam Heavy-metal-associated domain 35 90 IPR006121 GO:0046872
Dod04g0449 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 154 IPR045181 GO:0046872
Dod04g0449 154 Gene3D - 17 95 - -
Dod04g0449 154 ProSiteProfiles Heavy-metal-associated domain profile. 38 93 IPR006121 GO:0046872
Dod04g0449 154 SUPERFAMILY HMA, heavy metal-associated domain 29 95 IPR036163 GO:0046872
Dod04g0449 154 CDD HMA 33 92 IPR006121 GO:0046872
Dod04g0449 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0449 Dod-Chr4 6204941 6206409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0449 - - aprc:113872880 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2434 04 48129560 48130848 Dod04g0449 04 6204941 6206409 PCT