Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0443 ATGTCGTCGAGATATGAATATCCGATACTTGACAACCGGCCGATTCATCAGTGGAAGGTTACGGAGCTGAAAGAGGAGCTGAAGAGGAGGAAGTTAACTACCAAGGGTTTGAAGGATGATCTGGTGAGACGTTTGGATGAGGCCCTTCGTGCTGAGAGGGAGGCTGCTGAGGCTTCTGCGAAGGACGAGGCCAATGGTTTTGAGGGCCATGTTGGTGGGGTTGAAGATTCGCAGATGGTTACTGCAGTTGCTGAGGTGGTTCAAGCAGTTCAAGGGGAAAGTGCCCCTACGTTTGAAACAGTTGAAAAGGGGAAATATGATGTAGTTGAGCTCACTAATATGGAAAATGAAGAGAAGGTTCTGCAGGATGTGGATGATGACAGCAAGAAGAATGACAAGCAGGATGGTCTGACCATCCCAGTTGACATTAACAGTAGTGTGTCAGCCATGGATGAAGAAGTTGAACAAATGGATTTACCAGCTGGCGGAGATTCTGCAAATGTGGGAGATGAGCAAATTGCTCATGCTTCTATCGTTGAGGCCACTACTACAATTACTGAGAGTGTATCAACTGAAGTAGTGGTCAGTGGTCGGGATTCTTACATTGAAGAAAAGAATGATGGGGATTCAGCAACCAAGCTGGAGAATGAGCAGTCGGAGGCACAGCCGGATAATGAGGACTCAAAGCCCCAACTGGAGTATGACACAAAGCCCCTGTCCGAGGATCTCGTGCCCGCCAACTCTTCTGTCCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTAGTGATTCTGTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAGGCCGGAGATGGTGGAAGAACCATCATCCAGAAATGATGTTCCTGTTTATGATGAATCACATTCAATGGATGTTGGAGGGCTAGATGAGAAAAAGGCATCTATCGAAGAAAGTATCATTAATATTACAAGTCCAGACTTGAACAAGACCAATAGCAGTGACGATGTGGGGTATCCGGAAAAGTTAAACTTGGATAGAAGTTCTGGTGATGATTCCATGGAAGAGGATTTACCTGAGACTAAGCAGGTTGATTCCAAGTTTGATGTTGATGGAAAAGGCAAGGTGGAGAATATTGAAGTGCCTATTGTGAAGGAGGAAAGCAGTACTATAGTTGTGGGGGATGGTTTATCTGCAGGGAAAAGTGATACCCACCAAGATATTGACATGAGTCCTGTTGCCCTGGCTGAGAAACGAAAATTTAATGAACAAGCATCAGTTGGGAACAATGAGCCTGCAAAGAGGCAACGCAGGTGGAGCACTGAAACAGTTAAAGGACTTGATCCAGAAAGTGCTTCTCCCAGACCTGCTACTACACCCAGGGATGAGCCAGCTGCTCTGAAACGTAACTTCTCTAGGTCTGATTCCTCTGTATCTGATGATGCACCTAAAGAACGCATTGTTCCACCGTCACAAAGGTCCCCAACTAATTCCCTTAGGATTGATCGTTTTCTCCGTCCTTTTACCCTGAAAGCAGTGCAAGAGCTTCTTGGTAAGACTGGGAATGTCAGCAGTTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACCTACTCGTCCATTGAAGAAGCCATGGAGACGCGAAATGCAGTGTATAATTTGCAATGGCCTCCAAATGGTGGGCGCCTCTTAGTTGCTGAGTTTGTTGATCCTCAAGAAGTGAAAATGAAGTTAGAAGCTCCTCCCACTCCAGCTGCCTCTGTTGGCAGTGGCCCAGCTGTTCCTCCTGCACCACCATCCTCACAACCAGAGCCTTCCCCCCGATTGCACAGGGAGCAGCCTCCAGCTCCGGCTACTCTCCCACCTCCACCACCATTGGTGAAGCCCCCACCAGCGGCAAGAGACCAGCTTCCGTCCCCACCACCAGTCCCTGAGAAAGTTGACCCGCCTATTGTCACTCTGGATGATCTGTTCCGCAAAACCACAGCAACTCCTCGGATCTACTATTTACCTTTGTCTGAAGAGCAAGTTGCCGCAAAACTTGCAGCGCAGGGTAAAAGCACCAGGCACTAG 2133 0.4674 MSSRYEYPILDNRPIHQWKVTELKEELKRRKLTTKGLKDDLVRRLDEALRAEREAAEASAKDEANGFEGHVGGVEDSQMVTAVAEVVQAVQGESAPTFETVEKGKYDVVELTNMENEEKVLQDVDDDSKKNDKQDGLTIPVDINSSVSAMDEEVEQMDLPAGGDSANVGDEQIAHASIVEATTTITESVSTEVVVSGRDSYIEEKNDGDSATKLENEQSEAQPDNEDSKPQLEYDTKPLSEDLVPANSSVPENQVSEVNPSLGSQVKSDSISSDSVSINQKNELKDTIITDNVKLEQDIVRPEMVEEPSSRNDVPVYDESHSMDVGGLDEKKASIEESIINITSPDLNKTNSSDDVGYPEKLNLDRSSGDDSMEEDLPETKQVDSKFDVDGKGKVENIEVPIVKEESSTIVVGDGLSAGKSDTHQDIDMSPVALAEKRKFNEQASVGNNEPAKRQRRWSTETVKGLDPESASPRPATTPRDEPAALKRNFSRSDSSVSDDAPKERIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSIEEAMETRNAVYNLQWPPNGGRLLVAEFVDPQEVKMKLEAPPTPAASVGSGPAVPPAPPSSQPEPSPRLHREQPPAPATLPPPPPLVKPPPAARDQLPSPPPVPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVAAKLAAQGKSTRH* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0443 710 MobiDBLite consensus disorder prediction 197 287 - -
Dod04g0443 710 SMART sap_9 15 49 IPR003034 -
Dod04g0443 710 CDD RRM_ACINU 515 599 IPR034257 -
Dod04g0443 710 Gene3D SAP domain 4 62 IPR036361 -
Dod04g0443 710 MobiDBLite consensus disorder prediction 440 516 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 343 384 - -
Dod04g0443 710 Pfam SAP domain 17 49 IPR003034 -
Dod04g0443 710 MobiDBLite consensus disorder prediction 343 357 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 405 426 - -
Dod04g0443 710 ProSiteProfiles SAP motif profile. 15 49 IPR003034 -
Dod04g0443 710 MobiDBLite consensus disorder prediction 198 236 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 608 668 - -
Dod04g0443 710 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 6 708 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 485 501 - -
Dod04g0443 710 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 6 708 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 299 325 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 601 671 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 359 384 - -
Dod04g0443 710 Pfam RNSP1-SAP18 binding (RSB) motif 666 706 IPR032552 -
Dod04g0443 710 SUPERFAMILY RNA-binding domain, RBD 509 597 IPR035979 GO:0003676
Dod04g0443 710 MobiDBLite consensus disorder prediction 52 72 - -
Dod04g0443 710 MobiDBLite consensus disorder prediction 242 286 - -
Dod04g0443 710 SUPERFAMILY SAP domain 15 52 IPR036361 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0443 K12875 - gmx:100786288 977.237