LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0427	ATGGACTCAACAACGTTCGTCAATTTCAGAGCCTCTTCTCCTCCGACAATACAACAACAACCTTATCCCCTTCAACCCTCCCAGCTCCGCGTTTTGAGATTAAATCGTTTTGGTGTGGTTAAGAATCGCTTGGTTGCACGTTGCTCTTCTGGGTCGAATGAATTTGGCGCTTTCCATGGCTGCCACTTCCAACCCAATAAGCTTTTCATGCAGGAGGCTATTGGAGCTGAGTATGGGGAAGGCTTTGAGACTTTTAGAGCAGATGGACCGTTGAAAGTTGATGTGGACTATTTGAACGACAAGTTGCAAGATGGTTTTCTCCAGCGCATTCGCTATGCTATGAAGCCGGATGAAGCTTACGGCCTTATCTTCTCTTGGGACAATGTTGTGGCTGATACCCGAGCTCTGAAGAGGAAGGCATGGAAGCAGCTGGCCTCGGAAGAGGGAAAGGATATTCCGGAAGAGGGTGATATGCAAAGATTGAAGCTTTATTCAGGTGTTGATCATGTGTTGCATCAGCATTTTCTCTCAGATGAGGCAGAAAACGAGCTGGATAGACTAAAGTTGAGGTTTTCTCAGTTATATTATGATAATCTTCTAAGACTTGAAAAACCAATGGAGGGCCTGAAAGACTGGTTGGAGGCGGTTTATACAGCTCGCATCCCCTGTGCTGTTGTTTCTAGTCTTGATAGAAGAAATATTATAGAAGCTTTGGAACGAATGGGGCTGAATAAGCATTTCCAGGCTATTGTAACTGAAGAGGATGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCTGCTGTCAAGCTGGATCGGAAACCTTCCAAGTGTGTGGTTTTTGAAGACGATCCTAGGGGAGTAACTGCTGCACACAATTGTACAATGATGGCTGTGGCGTTAATTGGAGCTCATCCTGCGTATGATTTGGGGCAGGCTGATCTTACTGTTGCTAACTTTAGTGAACTTTCTGTGATCAACTTGCGAAGACTTTTTGCTAACAAGGGTTCTACATTTATGGACCTGCAGAAGCAGATCATAGAGAAAACTCCTCAGAAAAGGAAACTTACAATAGACACCATTTTCTAA	1089	0.4417	MDSTTFVNFRASSPPTIQQQPYPLQPSQLRVLRLNRFGVVKNRLVARCSSGSNEFGAFHGCHFQPNKLFMQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVADTRALKRKAWKQLASEEGKDIPEEGDMQRLKLYSGVDHVLHQHFLSDEAENELDRLKLRFSQLYYDNLLRLEKPMEGLKDWLEAVYTARIPCAVVSSLDRRNIIEALERMGLNKHFQAIVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAHPAYDLGQADLTVANFSELSVINLRRLFANKGSTFMDLQKQIIEKTPQKRKLTIDTIF*	363

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0427	362	PANTHER	HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN	1	362	-	-
	Dod04g0427	362	MobiDBLite	consensus disorder prediction	1	20	-	-
	Dod04g0427	362	PANTHER	HALOACID DEHALOGENASE-LIKE HYDROLASE	1	362	-	-
	Dod04g0427	362	Gene3D	-	122	318	IPR023214	-
	Dod04g0427	362	Pfam	Haloacid dehalogenase-like hydrolase	122	300	IPR041492	-
	Dod04g0427	362	CDD	HAD_BPGM-like	121	303	-	-
	Dod04g0427	362	Gene3D	Putative phosphatase; domain 2	132	205	IPR023198	-
	Dod04g0427	362	SUPERFAMILY	HAD-like	95	323	IPR036412	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0427	Dod-Chr4	5911923	5916693	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0427	-		-	gmx:100817685	597.816