Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0411 ATGGGAAAATCACTTCAATCTGCGGGTAGGCTGCAAGAGCTATCGCGGATTGTGTCATCAGCGAAACCCCAAAGGGCAAAGCAAACGCAACAACCGAGATCCGCAGCAAGTGCGAAAACGGGTGGTTCTTCTATTGTTAACGTGGAATCTCCGAAGAAGAAGAAGAAGGAGAGCCTCCTTGGAAGGGAAAGGGAAAGGGAGCAGCGTCGTCGGACACCACTCGCCACTGTGGTGGCCGATTGTGCGAAGCGGTGGTTCCATGAGACTCTCAAGGAGGCCAAGGCTGGTGACCCCGCCATGCAGGTTCTCCTTGGACAAATGTATCACTCGGGCTATGGTGTTCCCAGAGACCCCAAAAAGGGACATGCTTGGATCAGTAAAGTATCTAGAGTTCGAAGTTCAGTTTGGAAAGTAAGCGAAAAACATCCAGGTTACAGAGCGAGTGATTCAGATTCATGTGAAGTGGAGAACAAAGCTAAATCTTATCGATAA 492 0.498 MGKSLQSAGRLQELSRIVSSAKPQRAKQTQQPRSAASAKTGGSSIVNVESPKKKKKESLLGREREREQRRRTPLATVVADCAKRWFHETLKEAKAGDPAMQVLLGQMYHSGYGVPRDPKKGHAWISKVSRVRSSVWKVSEKHPGYRASDSDSCEVENKAKSYR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0411 163 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 160 - -
Dod04g0411 163 SMART sel1 98 133 IPR006597 -
Dod04g0411 163 MobiDBLite consensus disorder prediction 49 73 - -
Dod04g0411 163 SUPERFAMILY HCP-like 91 128 - -
Dod04g0411 163 MobiDBLite consensus disorder prediction 1 73 - -
Dod04g0411 163 MobiDBLite consensus disorder prediction 1 47 - -
Dod04g0411 163 Gene3D Tetratricopeptide repeat domain 3 132 IPR011990 GO:0005515
Dod04g0411 163 PANTHER EXPRESSED PROTEIN 1 160 - -
Dod04g0411 163 MobiDBLite consensus disorder prediction 141 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0411 Dod-Chr4 5338423 5339775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0411 - - gmx:100779520 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0635 08 7578153 7580237 Dod04g0411 04 5338423 5339775 ECH
Dod04g0411 04 5338423 5339775 Dod04g0411 04 5338423 5339775 ECH