Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0407 ATGTCAATCTCATTGTCTTCCCAAAGCTTGAAAATAGGCATAGTTGGGTTCGGCTCCTTTGGCCAATTTCTTGCAAAGACAATGATAAAACAAGGCCACACTCTAAGGGCAACTTCTAGAACAGATTACTCTGAACTCTGCCTCCAAATTGGCATCCATTTCTTCAGGGATGTAAATGCATTGCTTGACTCAGACAATGATGTGATACTGCTAAGCACATCGATCTTATCACTATCTGAGGTTCTGAGGTCAATGCCACTCACTCGTTTGAAGCGGCCAACACTGTTTGTTGATGTCCTTTCAGTCAAAGAGCACCCAAGAGACCTTCTACTACGAATGTTGCCAGAGGAATGTGATATACTCTGCACGCATCCAATGTTCGGGCCAGTGAGTGGGAAGGATGGGTGGAGAGACCTGACTTTCATGTATGAGAAAGTTCGAATACGAGATGAAGCTACCTGCTCTAATTTCCTCCAAATTTTCGCAAGTGAGGGTTGCAGGATGGTAACAATGTCCTGTGAGGAACATGATAAAGCAGCTGCCAAGAGCCAATTCATCACACACACAATAGGCAGGACATTAGGTGAAATGGATATCAAGTCCACACCAATTGACACAGTGGGCTTTCAGAGACTTGTTCAATTGAAGGAGACCATGATGAAGTGTAGTTTCGACCTGTATAGTGGGTTATTCGTGCATAACAGATTCGCCAGACAAGAGCTGGAAGACCTTCAACATGCTTTGTGCAAAGTAAAAGAGATGCTGGTTCAAAGGATGAATGAGGAGCAGGGTCGTCAAGAAAGAGGTGAAAATTGA 816 0.44 MSISLSSQSLKIGIVGFGSFGQFLAKTMIKQGHTLRATSRTDYSELCLQIGIHFFRDVNALLDSDNDVILLSTSILSLSEVLRSMPLTRLKRPTLFVDVLSVKEHPRDLLLRMLPEECDILCTHPMFGPVSGKDGWRDLTFMYEKVRIRDEATCSNFLQIFASEGCRMVTMSCEEHDKAAAKSQFITHTIGRTLGEMDIKSTPIDTVGFQRLVQLKETMMKCSFDLYSGLFVHNRFARQELEDLQHALCKVKEMLVQRMNEEQGRQERGEN* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0407 271 Gene3D - 2 177 - -
Dod04g0407 271 Pfam Prephenate dehydrogenase, nucleotide-binding domain 47 140 IPR046826 -
Dod04g0407 271 PANTHER AROGENATE DEHYDROGENASE-RELATED 5 267 IPR045011 GO:0006571|GO:0033730
Dod04g0407 271 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 10 271 IPR003099 GO:0004665|GO:0006571|GO:0008977
Dod04g0407 271 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 5 267 - -
Dod04g0407 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 171 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0407 Dod-Chr4 5319851 5323097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0407 K15227 - gmx:100787362 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0407 04 5319851 5323097 Dod04g0407 04 5319851 5323097 ECH