Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0406 ATGAAGCCCACTCAGGCTACCTCCTTCGCCACCAAATCGCCGCACGTGACCTTCTTTCGCCGCGCCACTCGCTCACGTGCTCCCCCGCAATACGACGCCGTCGTCGCCCGCGAATTATCCCGGAATGTCTGGACCGCAAAACGTCGTCGTATCAACCTATCCCTCTGCCACTCCAAAATCACCGCCGCCGCAGCGAAGCCCGAGAGCGACGGCGGCGTAACCGAAAACACGGCCGAACGCGCCGGGCCGACCCGGCGAGTCGTGCTGGCAGCGCCGTTTCTGGCCGTCGGCGCGTCGTTTGTACTCTCCGCTGCTACGAGGGCGGAGGATAAGGCACCGGCGCAACCGTATCCTCCGTCTCCGCCGCCTACGGCCGCGCAATTGACGGCGTCACCACCGGAGGAGCAGAAGCTGAAGACAGAGGAAGAGGCGATAACGTCGAGAATCTACGATGCGACGGTGATAGGGGAACCGTTGGCGATAGGGAAGAACAAAGGGAAGGTGTGGGAGAAGCTGATGAACGCGCGCGTGGTGTATTTGGGGGAAGCGGAACAGGTTCCGGTTCGTGATGACAAGGAATTGGAGCTCGAGATTGTGAAGAACTTGCACAAGCGATGCTTGGAGAACGATAAGCGCTTGTCTTTGGCTCTCGAAGCCTTCCCTTCGCATCTTCAGGAACCGTTAAATCAGTTTTTGGATAAGAAGATAGATGGAGAAACCTTGAAGTCTTATACATTGCATTGGCCACCTCAACGATGGCAGGAGTATGAGCCTGTTCTGAGTTACTGTCGCGAAAATGGAATTCGTCTTGTTGCATGTGGCACTCCGCGATCGATATTAAGGACTGTCCAAGCAGAAGGAATTCGCGGGCTTTCAAAGGCTGATCGTAAAGTGTATGCACCTCCAGCTGGTTCAGGCTACATATCAGGCTTTACTCCTATCTCCCGTAGATCATTGGTTGATATTACTTCAAATCCATCAATTCCCTTTGGTCCAAGCTCATATCTATCTGCACAAGCTAGAGTAGTTGAGGAGTACACTATGTCTCAGATCATCTTACAAAATGTGGTTGATGGAGGAGTCAATAGTATGTTAATAGTTGTGACTGGTGCAAGCCATGTTACATATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTAGTTATATTGCTTGACCCTGAAAGACAACTCATTCGCGGAGAGGGAGAAGTCCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGGAGGCGAGAGGCCCTCCCACAGGACCTTCAAAAGGGAATTGACCTTGGTTTAGTGTCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGCAGTATCCACTGATATCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCATAGATTGGCCATAGAAGAGGCTATATCAATAACAACTACACTATTAGCACAGTATGAAAAGCGCAAAGAAAATTTTCTCCAAGAGCTTGACTATGTTATTACGGACACTGTCAGGGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATTCTGATGCTACACCTGAAAACATTGATTCTGTAATGGGACTTCTGGGCTCCATCCCAGACAATGCATTTCAAAAGACTCCAGCAGGGACAAACTGGAATCTCAATCATAGAATAGCATCAGTATTGTTTGGTGGTTTAAAACTTGCTTGTGTTGGATTTATTTCAAGCATAGGAGCTGTGGCTTCATCAAACTCTCTGTATGCAATTCGTAAATTCCTTAATCCAGCAGTTGTTACTAATCAACGGATTATGAGGTCACCAATACTCAAAACAGCTGTTATTTATGCATGTTTTCTTGGAATATCTTCAAATCTCCGATATCAGGTTATTGCTGGGATAGTGGAGCATCGGATTTCTGAACAGTTTGCATCCCAAACATTTCTTGTAAATATGCTATCTTTTGTGGCACGGACAGTCAATTCTTATTGGGGAACCCAGCAATGGATTGACCTAGCTCGCTTTACCGGACTGCAAGCCAGAAAGACAGAGTCATCTGCTGCAGAGTCACCTACATCAGATTCTCCGAATCATGCAGCAATTGCATGCAACGAAACCGAGGAAGCCAGCATCGACGACCTAAAAGATAAATGA 2280 0.4785 MKPTQATSFATKSPHVTFFRRATRSRAPPQYDAVVARELSRNVWTAKRRRINLSLCHSKITAAAAKPESDGGVTENTAERAGPTRRVVLAAPFLAVGASFVLSAATRAEDKAPAQPYPPSPPPTAAQLTASPPEEQKLKTEEEAITSRIYDATVIGEPLAIGKNKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCLENDKRLSLALEAFPSHLQEPLNQFLDKKIDGETLKSYTLHWPPQRWQEYEPVLSYCRENGIRLVACGTPRSILRTVQAEGIRGLSKADRKVYAPPAGSGYISGFTPISRRSLVDITSNPSIPFGPSSYLSAQARVVEEYTMSQIILQNVVDGGVNSMLIVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQLIRGEGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRREALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFLQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYSDATPENIDSVMGLLGSIPDNAFQKTPAGTNWNLNHRIASVLFGGLKLACVGFISSIGAVASSNSLYAIRKFLNPAVVTNQRIMRSPILKTAVIYACFLGISSNLRYQVIAGIVEHRISEQFASQTFLVNMLSFVARTVNSYWGTQQWIDLARFTGLQARKTESSAAESPTSDSPNHAAIACNETEEASIDDLKDK* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0406 759 MobiDBLite consensus disorder prediction 725 742 - -
Dod04g0406 759 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 35 758 - -
Dod04g0406 759 CDD ChanN-like 176 400 IPR007314 -
Dod04g0406 759 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 35 758 - -
Dod04g0406 759 MobiDBLite consensus disorder prediction 114 128 - -
Dod04g0406 759 Pfam Protein RETICULATA-related 494 676 IPR021825 -
Dod04g0406 759 SUPERFAMILY EreA/ChaN-like 166 423 - -
Dod04g0406 759 Gene3D - 142 297 - -
Dod04g0406 759 MobiDBLite consensus disorder prediction 725 744 - -
Dod04g0406 759 MobiDBLite consensus disorder prediction 111 139 - -
Dod04g0406 759 Pfam Haem-binding uptake, Tiki superfamily, ChaN 168 387 IPR007314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0406 Dod-Chr4 5313769 5321658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0406 - - gmx:100790538 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0406 04 5313769 5321658 Dod04g0406 04 5313769 5321658 ECH