Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0396 ATGCCTTCTTCTCTCCAGCTAGAGAGATTCAATCCCAGCACCGACGCAACCGTTACCGCAGCAATCGCCAACGGCATAAACTGTCCCAAGCAGCCGCACCTGGCGGTCCCCTTCCTTCGCGGAGCAACGGTCCCCGACGCGGTGGCGCGTCACCACGCGCACGTGGTTGGCCCCAACCAGTGTTGCTCCGTCGTGACGCAGCAAATCGATGCGCCGGTCTCCGCCGTGTGGCCGGTGGTCCGTCGATTCGACAACCCGCAGGGATACAAGAACTTCGTGAAGAGCTGCCACGTCATCACCGAAGGCGACGGCTCAACGCCGCGCGTGGGCGCCGTGAGGGAGGTGCGCGTGGTGTCGGGCTTGCCGGCGGTGTCGAGCACGGAGAGGCTGGAGATCCTGGACGACGAGCGCCACGTCATCAGCTTCAGCGTGGTCGGCGGCGACCACCGCCTCAGGAACTACCGGTCGGTGACGACGCTGCACGCCCTCGACGGAGGCGACCGGACGGTGGTGGTGGAGTCGTACGCGGTGGACGTGCCGCCAGGGAACACGAAGGAGGAGACGTGCGCGTTCGTCGACACCATCGTGCGTTGCAATTTGCAGTCTCTGGCTCAGATCACAGAGAATAGTAACAAGAATCGTGAACAACAATGA 654 0.6346 MPSSLQLERFNPSTDATVTAAIANGINCPKQPHLAVPFLRGATVPDAVARHHAHVVGPNQCCSVVTQQIDAPVSAVWPVVRRFDNPQGYKNFVKSCHVITEGDGSTPRVGAVREVRVVSGLPAVSSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHALDGGDRTVVVESYAVDVPPGNTKEETCAFVDTIVRCNLQSLAQITENSNKNREQQ* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0396 217 SUPERFAMILY Bet v1-like 60 207 - -
Dod04g0396 217 Pfam Polyketide cyclase / dehydrase and lipid transport 61 205 IPR019587 -
Dod04g0396 217 PANTHER - 28 216 - -
Dod04g0396 217 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 28 216 - -
Dod04g0396 217 CDD PYR_PYL_RCAR_like 61 208 - -
Dod04g0396 217 Gene3D - 38 217 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0396 Dod-Chr4 5178263 5179577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0396 K14496 - gmx:100808416 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0653 08 7688597 7690254 Dod04g0396 04 5178263 5179577 ECH
Dod04g0396 04 5178263 5179577 Dod04g0396 04 5178263 5179577 ECH
Dod04g0396 04 5178263 5179577 Dod08g0653 08 7688597 7690254 PCT