Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0392 ATGTGCTGTAGTAGCGAATGCAAAACCGGAGTTGGTGTACTGTGTCTGTGGGACATGATTCCTCGACTTCTCCGAGCCTATATAAACCGCCGATTCCTAGTCACTCTCCGAGACACCCTCCGTTTCCTCCTCCGAACAATCCGAACCTTGTACATCTTCGCCACCATGTTCCAACCCTCAGCTTCGGAGCCACCACCACAACCACCCTTCGATCCGAGGCAACCCTCAGCGCCCATCTCGTACCCAATCAGAACCCTCAAGGAGCTCGAGTCTCGCTCCTACTTCGACTCCTTTCACTACCCTTTCAACAGAGCTTCGGTTCCCATTGCAAATCATGAGTCATCATCATCATCTTCTTCTTGTTCGATGCCCAATAGGAGGAGGTTGCTGGTGTGCCATGACATGTCTGGAGGGTACTTGGATGACAAGTGGGTACAGGGTGGGACCAACGCTGATGCTTATGCCATTTGGCATTGGCACTTGATCGATGTGTTTGTGTACTTTTCACACAGTTTGGTTACTCTCCCTCCTCCTTGTTGGACTAACACTGCTCATCGCCATGGCGTTAAGGTGTTGGGGACTTTCATCACCGAATGGGATGAGGGAAGGGCTACCTGCGATGTGCTGCTTTCAACAAAGGAATCTGCACAAATGTATGCAGAACGTCTGGCAGAGCTTGCTGTTAATTTAGGCTTCGATGGCTGGCTAATAAATATGGAGGTAAAGTTGGACCCAGGACAAATTTCTAATTTGAAAGAGTTTGTGGAACATTTATCATTGGAAATGCATTCTTTTGTGCCTGGATCATTAGTGCTATGGTATGACAGTGTTACAATTGATGGGGAACTGAAGTGGCAAGATCAACTAAATGGATATAATAAACCATTCTTTGACATATGTGATGGGATATTTGTAAACTATACATGGAAGGAAGACTGTCCAAGACTCTCTGCTGCTGCTGCAGGTGATCGGAGGTTTGATGTGTACGTGGGGATTGATGTATTTGGAAGAAACACATATGGGGGTGGACAGTGGAATGCAAATGTCGCTCTCGATGTACTAAGAAAGGATGACATATCGGCTGCAATATTTGCTCCTGGATGGGTTTATGAGACAAAGCAAGCGCCAGATTTTGAGACTGCTCATAATAGTTGGTGGGATCTTGTGGAAAAGTCATGGGGAGTATTGCGAAAGTATCCTAGAGAACTACCATTCTACACAAATTTTGATCAGGGACGCGGTTATCATTTTTCAATGGATGGAGAACCCATATCAGATGATACTTGGTGCAACATTTCTTGCCAAGGCTTTCAGCCAAATCTGGAGTTTGCTGATCCTACAAATCCTATTCAAGTTCTTGTAGACTTGAAGGAAGCATCATATAGTGGAGGGGGCAACATTACATTCAAAGGATCTCTTGAGGAGCATGCTTACTTCGAGAGGAAAATCTTTCAAGGAGAGTTTCTTCTGAACGAGTTGCCTATCCACTTCATTTATTCTGTGAAATCCGATGGCGATTCTTCATTGGGACTTAAGCTTGTGTTCACTTCCACCGGCAACAAAAGAGAGTCCATACTTCTGGCATCCCGGGCAGTGAATCATTCCTCCAACAACTTCAGCAAAGTAGTCATTGCAAGTTTATATAATGGATCACTATCTGGATGGGTTATAAATGAAGGTACAATTTCAATGAACGGATACACTTTGACAGAAATCCATGCGGTGTGCTATAGATCAGATTCTCCATCCAATAAAATGAGATGGCAATATAGATCAGATGGCAATGATGGTACTGTGGCTTCTACATCACATTATTTCGCAATTCTTGGACATATCACGATCAAGACTTCTAACTACAAGTCAGATTTCCCCCTTTCTTCTTCCTGGCTAGTTGATAGCAAATACATCAAATGGACATCAGGTCCTGAGGGTTCAAAGATCCTTAATATGAAAATTTCATGGGAACTGAAAGATGGAACAAATTATCAATTTAGAAACTTCAATGTGCATTTGGTGAAAGTATCAAAACAAGTAGGTGCTAACCCAGTTACAAAATTAGAAAATATGAAAGAGTACCTTGGAGTAGCACATGTCAACTGTTTTTATGTTTCTGACCTCAAAGTTCCATCTGCCACTTACAGTCTAAAATTTATAATACAAGCCAGTAGTGCTGATGGCACAACTCAAGAATTGAACGAGTCTCCATATTATGAATTGGAGGTTGAAGGTCCCCATATTAGCATTACAATGTAA 2253 0.4296 MCCSSECKTGVGVLCLWDMIPRLLRAYINRRFLVTLRDTLRFLLRTIRTLYIFATMFQPSASEPPPQPPFDPRQPSAPISYPIRTLKELESRSYFDSFHYPFNRASVPIANHESSSSSSSCSMPNRRRLLVCHDMSGGYLDDKWVQGGTNADAYAIWHWHLIDVFVYFSHSLVTLPPPCWTNTAHRHGVKVLGTFITEWDEGRATCDVLLSTKESAQMYAERLAELAVNLGFDGWLINMEVKLDPGQISNLKEFVEHLSLEMHSFVPGSLVLWYDSVTIDGELKWQDQLNGYNKPFFDICDGIFVNYTWKEDCPRLSAAAAGDRRFDVYVGIDVFGRNTYGGGQWNANVALDVLRKDDISAAIFAPGWVYETKQAPDFETAHNSWWDLVEKSWGVLRKYPRELPFYTNFDQGRGYHFSMDGEPISDDTWCNISCQGFQPNLEFADPTNPIQVLVDLKEASYSGGGNITFKGSLEEHAYFERKIFQGEFLLNELPIHFIYSVKSDGDSSLGLKLVFTSTGNKRESILLASRAVNHSSNNFSKVVIASLYNGSLSGWVINEGTISMNGYTLTEIHAVCYRSDSPSNKMRWQYRSDGNDGTVASTSHYFAILGHITIKTSNYKSDFPLSSSWLVDSKYIKWTSGPEGSKILNMKISWELKDGTNYQFRNFNVHLVKVSKQVGANPVTKLENMKEYLGVAHVNCFYVSDLKVPSATYSLKFIIQASSADGTTQELNESPYYELEVEGPHISITM* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0392 750 Gene3D Glycosidases 72 399 - -
Dod04g0392 750 CDD GH85_ENGase 130 449 - -
Dod04g0392 750 Pfam Glycosyl hydrolase family 85 139 417 IPR005201 GO:0005737|GO:0033925
Dod04g0392 750 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 22 744 - -
Dod04g0392 750 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 22 744 IPR032979 GO:0033925
Dod04g0392 750 Gene3D - 401 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0392 Dod-Chr4 5113683 5121476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0392 22 743 Glycoside Hydrolase AT3G11040 48.810 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0392 K01227 - gmx:100804658 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0392 04 5113683 5121476 Dod04g0392 04 5113683 5121476 ECH