Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0381 ATGGCGAACGATGAACTGTTATCTTCAATAATGTCCGATGTCAACAACTACGCCGGAAAAGACCCTCTTCTTCCTTGGCTCCGGGGCATCCGAAAGATGAAAGACACTTTTACCCCTCAAGCCCTCAAGGAAAACCTACCCGTGCTGTTGCAGAAATGCGCCCAAACCTTCCAGCTCGATCGCCGTTACAGAAACGACATGCGCTACCTTCGCGTTTGGCTCCACTTGATGGATTTTGTTGATGATCCAAGGGAACTTTTGAGAACCATGGAAGCTAATCATATAGGGACAAGACGTTGCCAATTCTACCAAGCATATGCTCTTTACTATGAGAAGAGTAAGATGTATGATGAGGCTGAGAAGATGTATCATCTGGGAGTTAAGAACCTTGCAGAGCCTCTGGATGAGTTGCAGAAATCATATGATCAATTCCTTCAGCGCATGGAACGAAGGACTGACAAGAGAACCAATCAGGAAGTGAGAGCTTCCAAGAGATCTCTGGCTGCAAAGAGCATCCCTCCTACCGAAAATAAGACTGAGGGAAGTAATGGAGCAAGCAGTGTTGAGGGTGTGCATAGGGGAACCCAAATTGCAAGTTCTGTAACTAAAGATGTAGCTAATGATAGATATGTAAGGACTAGAAGGGATGATACAGTTGTAATCAAGTTTGTTGACACTGCCATTGTTGGGAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTGGTGGATCCTACAATAAATATGAAGGAGGCGATGAATGCAATTAACAGCATGTTCCGGGCACCACTGGAGACTGTCCCGTTACCCAGGAAATCACACAGAAACCATTCAAAGGAAGATCATAGTACACGGAATGGTTTTGAAGTTTTTGTTGATGAAAACTTGGATGATGGAATCAAACCATCCGGTTCTTCATCTCTGCAGCAAAGAACTGATGCTAGCCAACCTCACCAAGAAGCACTCCAGATATATATTGATGATGAAGGATGTTCTGAGGCCGGTGACATAAATGTGAATCTGCCTGAAAATTCTACATCAGCTTCACAACTAAATGGCTTTGTTTTGCCCCATCCCAAGGATCTTCATTCTGAAAACTCGAGTAATATGGATGAAGAAAGTTCCCGTAGTTCAAAGTTCAGAGAGGATACAGTTGTTTGCAGATTTGTTGGCTCCGCAATTTTGGATGAGCCAGAGGTGGAGAATGTTTGCCACCATGGTTTAGTGGACCCCACAATCAACATGAAGGAAGCTATGAACGACATAAATGACATGTTCGGCAAGCCAATAGATTTTGTTAGGAAAAAAAGATCAGTGAAGCAAGAAAAACCACCCGAGATCAATAGCAGAAAGGAGCTTGGTGGGTTTTCAATCCTTGCTGATGATAACCTGGAACAAGAAGGAGGCCTGCCACCCCCACCACCACCAAAATTGCCCAGAAAGTCAAAGGAATCTGATTTATTTGAGCCAACTCTGCTCACAAAGGAAGCCATGGATGACATAAACGAGATGTTTAATATGCCATTGGATTTTTAG 1536 0.4375 MANDELLSSIMSDVNNYAGKDPLLPWLRGIRKMKDTFTPQALKENLPVLLQKCAQTFQLDRRYRNDMRYLRVWLHLMDFVDDPRELLRTMEANHIGTRRCQFYQAYALYYEKSKMYDEAEKMYHLGVKNLAEPLDELQKSYDQFLQRMERRTDKRTNQEVRASKRSLAAKSIPPTENKTEGSNGASSVEGVHRGTQIASSVTKDVANDRYVRTRRDDTVVIKFVDTAIVGKSEAEDACHHGLVDPTINMKEAMNAINSMFRAPLETVPLPRKSHRNHSKEDHSTRNGFEVFVDENLDDGIKPSGSSSLQQRTDASQPHQEALQIYIDDEGCSEAGDINVNLPENSTSASQLNGFVLPHPKDLHSENSSNMDEESSRSSKFREDTVVCRFVGSAILDEPEVENVCHHGLVDPTINMKEAMNDINDMFGKPIDFVRKKRSVKQEKPPEINSRKELGGFSILADDNLEQEGGLPPPPPPKLPRKSKESDLFEPTLLTKEAMDDINEMFNMPLDF* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0381 511 MobiDBLite consensus disorder prediction 300 319 - -
Dod04g0381 511 Gene3D - 8 164 - -
Dod04g0381 511 Pfam Mad3/BUB1 homology region 1 11 127 IPR013212 -
Dod04g0381 511 MobiDBLite consensus disorder prediction 436 490 - -
Dod04g0381 511 Coils Coil 134 154 - -
Dod04g0381 511 PANTHER OS11G0128700 PROTEIN 3 511 - -
Dod04g0381 511 MobiDBLite consensus disorder prediction 299 319 - -
Dod04g0381 511 MobiDBLite consensus disorder prediction 170 189 - -
Dod04g0381 511 ProSiteProfiles BUB1 N-terminal domain profile. 10 166 IPR013212 -
Dod04g0381 511 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 3 511 IPR015661 GO:0007094
Dod04g0381 511 MobiDBLite consensus disorder prediction 150 189 - -
Dod04g0381 511 SMART mad3_bub1_i 3 127 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0381 Dod-Chr4 5012318 5016139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0381 - - gmx:100783816 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0381 04 5012318 5016139 Dod04g0381 04 5012318 5016139 ECH