Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0377 ATGGTTCACTCCACTTCTCTTCTTCACCACAACAACCGTTTCCTCTTCTCCTTCAATTCCAAAGCCTCGCACTCTCACTCTCTCTCCTTCGCTAAGTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTATAACTTCGTCGCAGTCGCCATTGCCATGTTGCCGCGTCGCGCGCGTCTCCACCGAGGCCTTGGAACTCTCGCCGCCGTCGCCGCCGGGATTCAACTTCCGCCGCGAAATCGCCAGGCTCGCCGCCCTCCGCGACAAGCTCGCCGACTGCGCCACGCTCGACGACAAGCTGCGAGTCCTCGATTCCGATTCCAAGGTGCGCCGATTCTTCGGTTCTCGCCGGAGTTCTGGCTTCGCTAGGGTTTTGGCGGACCTCCGGTTGGGCTCCGGCGAGTTGTTCCTGCTCAAGTGCCTTGTTGCTGCGGGGCAGGAGCCGGTGCTGTGCTCCGGCGAGTCTGGAATGGAGTCCGCCGCTGCGGCGAAATCGAGGTCCTCGGTGAAGAGCGCGCTCTATGCTCTGGCGGATATGATAGAGAGCTTGGACTCGTATAACGGCAATGGCGGTCGTGGTGGTGGTTTCGGGAAGAGCGTGGGGATGGCTTTGGATGATGAAGAAATTCGAGACTTGAACGAGTTGTTAGAGACTTTGGGAGAAATTGAGCGATTCTATGATTGCATTGGAGGAATCATTGGATATCAGATAAAAGTGCTGGAGCTTCTTGTCCAAAAATCGTTTGAGAAACAAAGTGCAGGCTGGTCTCAGCACATGCATGAAGCTCAAGAATGCCAGATATTGGGAATTGATGCACCGAAAGGGCTCGACCTTTCTGAAAATACGGAGTATGCATCTCAGGCAGCTCTATGGGGTATAGAGGGTTTGCCAGACCTAGGTGAAATTTATCCCTTGGGGGGCTCTGCAGACAGGCTTGGTTTAGTTGATCCTAACACGGGTGAATGCCTTCCTGCTGCAATGTTACCGTATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTTTTGTACTTCAAATTTTATGGGAAACAATGTATAACTCCTGTTGCAATAATGACAAGTGCTGCAAAGAACAACCACAAACATGTCACTTCGCTGTGTGAAAGACATTCATGGTTTGGAAGAGGTCGATCAACTTTCCAACTCTTTGAACAGCCTCTTGTTCCAGTTGTCAGTGCTGAAGATGGGCAGTGGTTGGTCACCAAACCATTCATTCCTTTGAGCAAGCCCGGTGGTCATGGTGTCATATGGAAACTTGCTCATGACAAAGGCATCTTCAGATGGTTTTGTTGTCAAGGAAGGAAAGGTGCTACCGTGCGGCAAGTTAGTAATGTTGTGGCAGCGACAGATTTAACCCTCCTGGCCTTAGCAGGGATTGGTTTACGTCAAGGAAAGAAACTGGGGTTCGCATCTTGTAAGCGGAACTCAGGTGCCACAGAAGGAATAAATGTGCTGATGGAGAAGAAAAAACTCGATGGGAACTCGGAATGTGGTGTAACCTGCATTGAATACACTGAGTTTGACAAGTTTGGAATTACAGATGGACCTCGTACTCCAGAAGGTTTTCAGGCAGATTTCCCAGCCAATACGAACATCTTGTACGTGGATTTACCTTCAGTGGAGAAAGTCGGATCAAGTAATAGTGAAAATTGTTTACCAGGAATGGTGCTAAATACAAAAAAGCCAATAGTTTATGTGGATCAGTTTGGAAGACACCGTAGCGTATTTGGTGGTAGACTAGAATGCACAATGCAAAATATAGCGGACAATTTTTTTAATACAAATTCATCTAGGTGTTACAACGGCGCGAAAGACAAGCTAGATACATTTATTGTATATAATGAAAGAAGGAGGGTTACTTCATCTGCGAAGAAAAAAAGAAGACATGGAGACAAGTCTTTGCACCAGACACCTGATGGCTCTCTGTTAGATATCTTGCGAAATGCCCATGATCTTCTTTCACAGTGTGGTATAAGACTTCCTGAGATTGAAGCTAATGAGAACTATGTTGATTCGGGACCACCATTTCTCATCCTTCTACATCCTGCTCTTGGTCCTCTTTGGGAGATCACTAGACAAAAGTTTTACGGTGGTTCCATATCGAAGGGCTCTGAGTTACAAGTAGAGGTTGCAGAATTCTTGTGGAGGAATGTTCAGCTCAATGGAAGCCTGATTGTAATAGCTGAAAATGTTATGGGCTCCATGAAGATCAATGAGAGCAGTGAATCCATACTACACTATGGGCAAAGGTGTGGAAGATGTAAATTGCAGAATGTAAAGGTGTTGAACAAGGGTATTGATTGGACTTACGATGGAAACATATACTGGAAACATGATGTTCAGCGGTCTGAAGTATTGCAGATCATACTGCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAGTTGAAGATTACTCCAGGAAGCCCAGGTCTCCTCTTTAACTTAGAACTTTCTTTGGCTTGGTTGTCTGAAATCTGA 2559 0.4642 MVHSTSLLHHNNRFLFSFNSKASHSHSLSFAKSLSSSSSSSSITSSQSPLPCCRVARVSTEALELSPPSPPGFNFRREIARLAALRDKLADCATLDDKLRVLDSDSKVRRFFGSRRSSGFARVLADLRLGSGELFLLKCLVAAGQEPVLCSGESGMESAAAAKSRSSVKSALYALADMIESLDSYNGNGGRGGGFGKSVGMALDDEEIRDLNELLETLGEIERFYDCIGGIIGYQIKVLELLVQKSFEKQSAGWSQHMHEAQECQILGIDAPKGLDLSENTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPNTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKFYGKQCITPVAIMTSAAKNNHKHVTSLCERHSWFGRGRSTFQLFEQPLVPVVSAEDGQWLVTKPFIPLSKPGGHGVIWKLAHDKGIFRWFCCQGRKGATVRQVSNVVAATDLTLLALAGIGLRQGKKLGFASCKRNSGATEGINVLMEKKKLDGNSECGVTCIEYTEFDKFGITDGPRTPEGFQADFPANTNILYVDLPSVEKVGSSNSENCLPGMVLNTKKPIVYVDQFGRHRSVFGGRLECTMQNIADNFFNTNSSRCYNGAKDKLDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPDGSLLDILRNAHDLLSQCGIRLPEIEANENYVDSGPPFLILLHPALGPLWEITRQKFYGGSISKGSELQVEVAEFLWRNVQLNGSLIVIAENVMGSMKINESSESILHYGQRCGRCKLQNVKVLNKGIDWTYDGNIYWKHDVQRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGYKLKITPGSPGLLFNLELSLAWLSEI* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0377 852 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 201 653 IPR029044 -
Dod04g0377 852 SUPERFAMILY Nucleotide-diphospho-sugar transferases 212 743 IPR029044 -
Dod04g0377 852 PANTHER UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 3, CHLOROPLASTIC 14 841 - -
Dod04g0377 852 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 14 841 IPR039741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0377 Dod-Chr4 4968085 4976788 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0377 K22920 - gmx:100788781 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0377 04 4968085 4976788 Dod04g0377 04 4968085 4976788 ECH