LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0347	ATGAGGATCGCGCTCGACCCATTGGAACCCACCTCGGAGCCAAGGTGCTCTCTCACTCCCAAAGACGAACTCGAATGGGTCCCACTCCTCAAACACCCTCTCTTCTCCTCCTCAGCCGCACGCGCAGCCGCCACCACCACCTCCTCCTCCAGGAACCTTCTCGCATGGGACGGAGCTTCCCGCCTCTATTTCTGGGACTCCGCCACCAACTCCCTCCACCGCCTCTCTCTGCGCCTCGGCGACCCCGATCCCACCTCCGTCCTCGCCGCTTCTCCCTCTAAGGTGTTGCGAGCTGACGTGGAGCTAAGCTTTGATGTCCGCAGAATCTCTATCAACAGGAATGGAACCGCGATGCTCCTTTTCGGTTCTCAGAGACTCTCTGTTATGTACCTCTATGGACGTGCTTCCAAAAAGGACGTTAATTTGATTTGCAGGACTATTACAGTTGGTTCAGAAACATATTCTGACGGCAGCGATGATATTCGTGTATTACAAGCGTTATGGCACCCCTACAGTGATACTCATTTGGGAATCCTTTCCTCTGACTCAGTTTTCCGGCTTTTCAATCTTGCTGAGGATCCTTTGCAACCAGAACAAGAATATTATCTACAACCTGTGGAGCGTGCTAGATCCAGGAGTGCCTCATCAGTGTGTCCGGTTGATTTTTCTTTTGGGGGTGATCACTTATGGGACAGATTTAGTGTTTTTATTTCGTTTAGTGATGGGGCTATCTATGTACTTTGCCCGCTTGTTCCATTTGGGAGCCTCTTCAAATGTGAGTCTTTATTAGAAATATACATTGATGCTCAGACATTTGGTCTAAAATCGGCCAACTCTGTAGCAGCTAGTAATTCAAAGTTGGCAATCTCCTGGTTAGAAGCAACCTTTCCTGAATTACAAAACCAAGAAACTGATGGAGACAACCTGTCTTTGATAAGAGCTCATGCTTATGCTATATTTGATGCATCATTAGTCTTGCAGGGACCTCTGAAAAGAGTAGGTCAGGGTGGAAATGAAGATTCAGTTGGTCATAGTGCTGAATGTGAAGGTCGTGTAGTTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCTATTTTGGTTACTGCTTGGAGTGGTGGGCAATTACAGATAGATGCTCTAGCTGATGAGATCCAACCTCTCTGGAGTGTTGGTAGTCCGCCTGGTCTTCGTGTTGATTCCCATGACCAAATTCTTGGGCTTGCTATGATTTGTGAGTCAATTGCCAGCAACCATCTTGAGAAGCTTGATCACAATGCCTGGTTGGGCAGCCCACCCCCTCTGTTAAGACTGGCTATTGTTGACTTGGCTCTGCCACGAAAAGCAGAAAGTGGTTATAATATCTCATTGTTCAATGACACCCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGTATTGATTCAATAATGTTGCATTTTCTTCCATTTACCAGTCAGGCAAATGGCAAGGATGATACAATGAGAACACCTTCTGTGCATCCTGTTCTAAATACATGCCAGAGTGGATGTACGTCAGAGCCTTCACTCTGTGGTTTCGTGTCATTGTCAGATTCATTTGGCTATTCGTGGATAGTGGCTGTTACTCTTTCTCAAGAGTGTGTTGTGCTAGAGATGAAAACTTGGAACCTCTTGCTTCCAGTAAGCATTGATACAGAGAAGAAACTGAGTCAATCAGAAGGAGAATCCAGAGAAAGAGAAATACCGACTATAATTAGCAAAGAACTACTTAGTGGGCCCAAGGAGGTACTTGTTCCTCAGGCCGCTCCAAGTTTGCGTTCTGTTGCCGCTGATTCAATTGAAGGCAGATCAACACTTCATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGCACATAAGGTGTATCTGGAGCTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAACGACCAACATTCTCGTTTGGGCGATGCACAGCAGAAACTTTTAAAAGTTGAGGAGAAAGAGTCTGTATTACAGAAAAGGATAGAGTGTGCAGTTCAAATGTATAATTCTTTGGAGGAGCGCTTGCAACGATTAAGGAATTTACCTTGTGCTCACAAAAAGCCACTGTCCAGAGCAGAGCGACAGTTCAAGTCCGAGCTTGATCACTTCAGGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGACGCCCTAAATTCAAGGCTGAGAAAGCAAATGCAAGCGTCTAAAGATAGTCGCCAACAACAGAAAATATCAGGGAAGAAAAAAATTTCTGCTGGGGATGATCAGATGTCCATGCTCAAATTATCGCTTGAAAAACTCTCACTCGTAAATACAGAAAATTCAAAGAAAGTTAAGCTTGTCGAGTCTACATTGAAAAACAAAGAAAGAAGCCACAGGGAATCAAGCCTGCCAATGCTTTAA	2424	0.4476	MRIALDPLEPTSEPRCSLTPKDELEWVPLLKHPLFSSSAARAAATTTSSSRNLLAWDGASRLYFWDSATNSLHRLSLRLGDPDPTSVLAASPSKVLRADVELSFDVRRISINRNGTAMLLFGSQRLSVMYLYGRASKKDVNLICRTITVGSETYSDGSDDIRVLQALWHPYSDTHLGILSSDSVFRLFNLAEDPLQPEQEYYLQPVERARSRSASSVCPVDFSFGGDHLWDRFSVFISFSDGAIYVLCPLVPFGSLFKCESLLEIYIDAQTFGLKSANSVAASNSKLAISWLEATFPELQNQETDGDNLSLIRAHAYAIFDASLVLQGPLKRVGQGGNEDSVGHSAECEGRVVSFLYNLVSKDSILVTAWSGGQLQIDALADEIQPLWSVGSPPGLRVDSHDQILGLAMICESIASNHLEKLDHNAWLGSPPPLLRLAIVDLALPRKAESGYNISLFNDTLMPERIYSLHDGGIDSIMLHFLPFTSQANGKDDTMRTPSVHPVLNTCQSGCTSEPSLCGFVSLSDSFGYSWIVAVTLSQECVVLEMKTWNLLLPVSIDTEKKLSQSEGESREREIPTIISKELLSGPKEVLVPQAAPSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQHSRLGDAQQKLLKVEEKESVLQKRIECAVQMYNSLEERLQRLRNLPCAHKKPLSRAERQFKSELDHFREVELDALHSSVDALNSRLRKQMQASKDSRQQQKISGKKKISAGDDQMSMLKLSLEKLSLVNTENSKKVKLVESTLKNKERSHRESSLPML*	808

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0347	807	MobiDBLite	consensus disorder prediction	736	759	-	-
	Dod04g0347	807	MobiDBLite	consensus disorder prediction	739	757	-	-
	Dod04g0347	807	Pfam	Nuclear pore component	29	225	IPR019321	-
	Dod04g0347	807	Pfam	Nuclear pore component	452	789	IPR019321	-
	Dod04g0347	807	PANTHER	NUCLEOPORIN NUP84-RELATED	18	797	IPR037700	GO:0000055\|GO:0000056\|GO:0006913\|GO:0017056
	Dod04g0347	807	MobiDBLite	consensus disorder prediction	788	807	-	-
	Dod04g0347	807	Coils	Coil	674	694	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0347	K14318		-	gmx:100801853	1321.99

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod04g0347	04	4573564	4581120	Dod04g0347	04	4573564	4581120	ECH