Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0344 ATGGGAAGGTTTTTTGTGGTCAACCTGGAAGGGAAGATCTACAGCTGCAAACACTGCCGCACCCACCTTGCGCTTTGTGAAGACATCGTCTCCAAGGCTTTCCACTGCAGACATGGGAAAGCTTATCTCTTCAATAAGGTTGTGAATGTTTCTGTTGGAGAAAAAGAAGAGAGAATGATGATAACTGGTTTGCATACTGTGGCTGACATTTTCTGTGTGGGTTGCGGATCAATTGTTGGTTGGAAATATGAGACTGCCCATGAAAAAAGCCAGAAGTACAAGGAAGGAAAATCAGTGCTTGAACGGTACAAGGTGTCAGGTCCTGATGGAAGCCATTATTGGATTGCTCATGAAGCAAATGCTGGTGGAAGTGATGCAGATGATGCTTAA 390 0.4436 MGRFFVVNLEGKIYSCKHCRTHLALCEDIVSKAFHCRHGKAYLFNKVVNVSVGEKEERMMITGLHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERYKVSGPDGSHYWIAHEANAGGSDADDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0344 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
Dod04g0344 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 106 IPR004910 -
Dod04g0344 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Dod04g0344 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0344 Dod-Chr4 4536099 4539111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0344 - - cpap:110819345 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0344 04 4536099 4539111 Dod04g0344 04 4536099 4539111 ECH
Dod04g0344 04 4536099 4539111 Dod08g0699 08 8195656 8198813 PCT