Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0339 ATGGTACCCCAGAAGCAAGCTGAAGAAGCCATAATGCCAAGCCTTAACCAGACGGTGGAGCGTGATGAGGGAGAGGAAGAGAAGGTGGAAGGTTCACATTTTAGCTTGAAAAGTGTTCTCTGGCATGGTGGGTCTGCCTATGATGCCTGGTTCAGCTGTGCCTCAAATCAGGTGGCTCAGGTTCTGTTAACTTTGCCATACTCATTCTCTCAGCTGGGGATGCTTTCAGGCATCATATTCCAAGTCTTCTATGGCCTGCTTGGTAGTTGGACTGCTTACTTGATTAGCATTCTGTACATAGAGTACAGAAGCCGCAAGCAGAAAGAGAATGTCAGCTTCAAGAACCATGTCATTCAGTGGTTCGAAGTGTTGGAAGGTTTGCTTGGTCCATATTGGAAAGCTGTTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTTATAGCTTGTGCAAGTAATATATACTACATAAATGACAAATTGGACAAGAGGACTTGGACCTACATTTTCGGAGCTTGCTGTGCCACCACAGTGTTCATACCATCATTCCACAACTACAGAATTTGGTCCTTCCTTGGCCTTGGCATGACCACCTACGCTGCTTGGTATCTCACCATTGCGGCCCTTGTTCATGGCCAGGTTGACAATGTGACTCACTCGGGCCCAACCAAAATAGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATATATCTATCTTTATGCCACTCTTTATGTGTTCACCCTCACCCTACCATCTGCTACTGCCGTTTACTGGGCCTTTGGCGACCAACTCCTGGATCACTCCAATGCCTTCTCCCTCCTCCCCCGCAACGGTTGGCGTGACGCCGGCGTCATCCTAATGCTCATTCACCAGTTCATCACCTTTGGATTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTGATAGGGATGCATGATACCAAGAGCATGTGTTTGAGGGCTCTAGCACGGTTACCTGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGCCCCATTAACTCAGCTGTGGGGGCTCTCTTGGTCAGTTTCACTGTCTACATCATCCCTGCTTCTGCCCATATGCTCACTTACAAGTCTGCCTCCGCAAGACAGAATGCCGCAGAGAAATTGCCATTCTTCATTCCTAACTGGACGGTCATGTACATGGTGAATGCATTTGTGGTGGTGTGGGTTCTAGTGGTGGGCTTTGGGTTTGGAGGATGGGCCAGCATGACAAACTTCATCAAGCAGGTTGACACATTCGGGCTATTTGCCAAATGCTATCAGTGCCCTCCAAAAGTGATCATGCCCTCTAACCATACTATGCATCACTGA 1440 0.4764 MVPQKQAEEAIMPSLNQTVERDEGEEEKVEGSHFSLKSVLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQVFYGLLGSWTAYLISILYIEYRSRKQKENVSFKNHVIQWFEVLEGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYAAWYLTIAALVHGQVDNVTHSGPTKIVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTLPSATAVYWAFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSMCLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYKSASARQNAAEKLPFFIPNWTVMYMVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKVIMPSNHTMHH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0339 479 PANTHER OS05G0424000 PROTEIN-RELATED 2 468 - -
Dod04g0339 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Dod04g0339 479 PANTHER AUXIN INFLUX TRANSPORTER 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0339 Dod-Chr4 4435344 4441917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0339 1 465 Organic Solute Cotransporters AT2G21050 76.774 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0339 K13946 - gmx:100795466 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0706 08 8471975 8478105 Dod04g0339 04 4435344 4441917 ECH
Dod04g0339 04 4435344 4441917 Dod04g0339 04 4435344 4441917 ECH
Dod04g0339 04 4435344 4441917 Dod08g0706 08 8471975 8478105 PCT