Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0338 ATGGTTGATTTACATTGGAAATCAAACACGGTCAACTCCGACATGTCTTCCAAGGCTCCAAAACTCTCTCTCTCCGACAAGCCCTCGCCACGCGGCCCACCGCCCTCCCTGCGCCTCCCCTTCCGCACCACCGACATCTCCGCCGCCGCCACGCCCCTCTGCGCCGCTTACGACCACTACCTCCGCCTCCCGGAGCTCCGAAAGCTCTGGTCCACCATAGACTTCCCCACCTGGACCAACGAACCAATCCTAAAACCCGCTCTGCAAGCCCTCGAGATCACGTTTCGCTTCCTCTCCACCGTGACCTCCGACCCAAGACCCTACGCGAACCTCAGGGAGTGGAACCGCAGGGTCGAGTCCCTCGCCACGTGTCAAGTCGAGATCATCGCCATGCTCTGCGAGGACGAGGAGCTCGATCCTGAGACACGTGGCACAGCGCCAACCGCCGATCTAACCGCTTCCTCCCAGAGCAGAATAAGCTACAGCGAGTCCAGCTTACTCCCTCGCCTCGCCACGTGGCGCGTATCCAAGGACGCGGCGCAGAGGATCCTCCTCACCGTGGAGTGCCAAATGACACGCTGTCCCTACACTTTGGGCCTCGGCGAGCCCAATATCGCGGGAAAGCCCAGCCTGCTATACGACGCCGTTTGCAGGCCCCGTGAACTCCACGCGCTCCAAACGACGCCGTTTGCGGCGGAGAACTACGAGAACCTAACCGTACACGCGTCGCACCAGATCGCGGAGTCGTGGATCCGCGTTTCGCGGAAGCTTCTAGAACGGATCGGAAGCTCGATCGAGAGTAGAAGGTTCGAGAAGGCTGGGAGTGACTGCCACGCGGTGGAGCGGATCTGGAAGCTTCTAGCGGAAGTCATGGACGTTCACGTTATGATGGATCCAGACGATTTCCTGAGGCTGAAGAACCACCTTGCGGTGCGTTCGTCATCTTCGTTTTCGTCCGAAACGGCGCCGTTTTGCTTCCGATCGAGGGAGCTCGTTGAGGTTGCGAGGATGTGCAGGGATCTGAGGCACATGGTGCCGGAGGTGCTGGGAGTGGAGGTGGATCCGAAGGGAGGGCCGAGGATTCAGGAGGCGGCGATGACACTTTACGCGGCGGAGAAGAGGGAGGAGGGTGAGAAAGTTCACTTGTTGCAGGCGATGCAGGCGGTGGAGGCGGCGATGAAGGGATTCTTCTTCGCGTACAAGCAGGTGGTTGCGGTGGTTATGGGGAGCGTTGAGGCGAGTGGGAACCGAGTCGGGATGAGTTGCGACGGTGGTGACTCGCTGAGTCAGATATTCATGGAGCCCACGTATTTTCCTAGCTTGGACGCGGCCAAGACTTTCCTTGGATACTTTTGGGATAACGATAACAACAACAATAATAGTAATAATGGTGTTGTTGTTGGTAAGGGTTGTGATAGAAGGATTCGTTGCTAG 1434 0.5837 MVDLHWKSNTVNSDMSSKAPKLSLSDKPSPRGPPPSLRLPFRTTDISAAATPLCAAYDHYLRLPELRKLWSTIDFPTWTNEPILKPALQALEITFRFLSTVTSDPRPYANLREWNRRVESLATCQVEIIAMLCEDEELDPETRGTAPTADLTASSQSRISYSESSLLPRLATWRVSKDAAQRILLTVECQMTRCPYTLGLGEPNIAGKPSLLYDAVCRPRELHALQTTPFAAENYENLTVHASHQIAESWIRVSRKLLERIGSSIESRRFEKAGSDCHAVERIWKLLAEVMDVHVMMDPDDFLRLKNHLAVRSSSSFSSETAPFCFRSRELVEVARMCRDLRHMVPEVLGVEVDPKGGPRIQEAAMTLYAAEKREEGEKVHLLQAMQAVEAAMKGFFFAYKQVVAVVMGSVEASGNRVGMSCDGGDSLSQIFMEPTYFPSLDAAKTFLGYFWDNDNNNNNSNNGVVVGKGCDRRIRC* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0338 477 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 461 IPR038759 -
Dod04g0338 477 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 213 448 IPR037217 GO:0019441|GO:0020037|GO:0046872
Dod04g0338 477 Pfam Hs1pro-1 protein C-terminus 191 454 IPR009743 -
Dod04g0338 477 MobiDBLite consensus disorder prediction 1 39 - -
Dod04g0338 477 MobiDBLite consensus disorder prediction 1 23 - -
Dod04g0338 477 Pfam Hs1pro-1 N-terminus 1 188 IPR009869 GO:0006952
Dod04g0338 477 Gene3D - 213 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0338 Dod-Chr4 4399850 4402124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0338 - - gmx:547603 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0338 04 4399850 4402124 Dod04g0338 04 4399850 4402124 ECH
Dod04g0338 04 4399850 4402124 Dod08g0709 08 8533843 8535677 PCT