Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0318 ATGTTGTTGCACCTTTCAAACGCAACGGCATGGTTGCATTCCCATTCTCCCTCCTCTTCTTCATCACCAGTCCTTGTCTGTTCCTCTTCAACCGCAACCCAACCACATTCTACCCTGGCCGTTAACACCAACTTCGACCCCGACGTCGACCTCTTCGGCGACGCACACGTCGTTGCAGACAGCGTGACCCTCACGCGCCCCTCCGCACCGAGCTCCGGCCTCCTCCTCCGCACCACGCCGGTCACATTCTCCGGGGGTGCCTCCTCCCTCTCCGCGGAGTTCACCTTGTCGATCTCCCCCTCCCCTTCCGCCGCCTCCGGCGACGGCCTCGTCCTAGTCCTCGTCCCCGTCCCCGGCGACTTCTCCGCCGCGTTCCCGGTGAACGACTCCTTCGGCCTCTCACGACAGCACAGCAAGAACTACGTCGCCGTCGAGTTCGACACCTCGAAAGACGACAACGTCAACGATCCGAACGAAAACCACGTCGGCATCGATGTCGGGAGCCTCGTGTCCGTCGCAATCGCAAACGTCTCGGATTCAAATATCGTCCTCAACAGCGGCGAGAAACTAACAGCTTGGGTTGATTACGTGGCAGGTTCTAAGAAGTTAGAGGTTCGGTTATGCAAGTTTGGGGAAAAACGACCAGGTAACCCTGTCGTTTCGCATGAGATCGACTTGGTTAAGGTTTGGGGCGGGGAACGCGTGTTCATTGGGTTGAGTTCTTCGAATGGCGGGGATTCAGTTCAGGTTGTTAGAGTTTATTCGTGGAAGGTGAGTTTGGGGAAGGTTGAGAAATCGTCGTTGCATTCTGAGCCTGCGGATCCTAGGAAGGGTTGCTCTTATGGACACGTGGCGGTTGTTGAGGAGAGGAGTAGTGAGAGGGGTGTCGGAGGAACGTTGTCGGTTCTTGCTGGGGTGATATTTGGGACGGGTTGTGTTGCGTTGGTGTCGTTTGTGGGGTTGTTTATGTGGGCAATATTCTTCCAGAGGCGTGAGGAGGAGGTGTTTCTTGGGAAGATCCCTGTTAACCCTTCGGAGATCAGGTACGAGAGGATTGATGTGGCTGTGGACAAGAACACTGAGGAGGATGGGAATTAG 1098 0.5592 MLLHLSNATAWLHSHSPSSSSSPVLVCSSSTATQPHSTLAVNTNFDPDVDLFGDAHVVADSVTLTRPSAPSSGLLLRTTPVTFSGGASSLSAEFTLSISPSPSAASGDGLVLVLVPVPGDFSAAFPVNDSFGLSRQHSKNYVAVEFDTSKDDNVNDPNENHVGIDVGSLVSVAIANVSDSNIVLNSGEKLTAWVDYVAGSKKLEVRLCKFGEKRPGNPVVSHEIDLVKVWGGERVFIGLSSSNGGDSVQVVRVYSWKVSLGKVEKSSLHSEPADPRKGCSYGHVAVVEERSSERGVGGTLSVLAGVIFGTGCVALVSFVGLFMWAIFFQRREEEVFLGKIPVNPSEIRYERIDVAVDKNTEEDGN* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0318 365 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Dod04g0318 365 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 260 IPR013320 -
Dod04g0318 365 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 26 363 - -
Dod04g0318 365 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 26 363 - -
Dod04g0318 365 CDD lectin_legume_LecRK_Arcelin_ConA 43 256 IPR001220 GO:0030246
Dod04g0318 365 Pfam Legume lectin domain 44 263 IPR001220 GO:0030246
Dod04g0318 365 Gene3D - 37 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0318 Dod-Chr4 4172888 4174645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0318 19 259 Receptor kinase-like Gene Family AT5G55830 32.955 1.45e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0318 - - aip:107622087 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0318 04 4172888 4174645 Dod04g0318 04 4172888 4174645 ECH