Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0313 ATGGATGCTTTGTCTAAGAAGAGTGAAAAGAAAAGAGACGGGTCTAAGGTTTGTAGTGGTGGTGGTGGTGATGGAGCTAAGAAAGAGTCCCTTAGTACTGATTCCACTGCAGAGTCCAGAGAAAACAGCTTCAGTGGATCCAGCTCCTCATCAGGTTCAACAAGTGAAGAAAAAAAGGCAAAAGGGTCTTCTTCTCCATCTCCCCCTCTTGGCTGGCCTATTCTGAAGGCTACAGTCTCGAAGTGTGCAAAATCTGATGAAAAAGAAAGTGAACATAAACGCCACTTGGAAGACTCAAAATTTACCAGTATCAGTTCAAAAATGTCAGATGTTGATATGATGAAGGAAAGGTTTGCAAAATTGTTGCTCGGTGAAGATATGTCAGGCTCTGGAAAAGGGGTTTGCACTGCCTTGGCCATCTCAAATGCTATTACTAATCTGTGTGCCACTGTGTTTGGACAATTATGGAGACTAGAACCTCTACCTTCCGAAAAGAAAGCTATGTGGATGAGAGAGATGGAATGGCTTGTAAGCGTTAGTGATCACATTGTTGAGTTGATACCTTCTTGGCAAACATTTCCTGATGGAACTAAACTTGAGGTAAAATTGGATCCAGTGAACTGTGATTTTTTTTTCGACATAAGGGATTGTGCTGTTTCTAACTTTCTATTTCTAATATGGTGCATTCTGCAGGTAATGACTTGCAGGCCAAGGACTGATATTTTTATCAATCTTCCAGCTCTTCGCAAACTTGACAACATGCTTCTGGAAATTTTAGATGGTTTCACCAATACAGAGTTTTGGTATGTTGATCAAGGAATTGTAGCCCCAGATGCTGATGGATCAGCCTCTTTTCACAAGACAATTCAGCGGCAAGAGGAGAAGTGGTGGCTCCCTGTACCTCGTGTGCCCCCTACCGGTCTCAGTGACAACTCAAGAAAGCAATTGAATCAGTCACGAGAATGTGCAAACCAAATACTAAAAGCAGCCATGTCTATCAACAGCATTGCTTTGGCTGAGATGGAAGTTCCAGAGTCATATTTGGAAATGCTTCCTAAGAATGGAAGGACTTGTCTGGGGGATTTCATTTATCGCTACATTACATCAGATCAATTTTCCCCTGAATGCCTGCTTGATTGCTTAGACCTCTCCTCTGAGCATGTTGCACTAGAGATTGCTAACCGTGTGGAAGCTGTGATTTATGTATGGCACCGGAGAGCTCACTCTCACTCCAGACCATCACCTAACCCGAACCGATCAACTACAAAGTCCTCCTGGGAGATAGTCAAGGACTTCATGGTTGATGCAGACAAGAGAGAATTGCTTGCAGAAAGAGCTGAAAACATTCTGTGTTCCTTGAAGCAGCGGTTCCCAGGCTTAACTCAAACGACCCTGGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCCATATTGGAGAGCTACTCGAGAGTTTTGGAGAGCATGGCATTCAACATTGCAGCTCGCATTGACGATTTGTTGTATGTTGATGACCTGACCAAACACTCAGATAGATTTCCACTGGTTCCCACAGTTAATGTGGTGTCTCAGCAGAAGGTCTCCCGTCCATCATTCTCAGTGTCTGTCTCAGGCACTCCCCACAAAGCAGGGGTAGGCACACCTGGCTTTTCGCCTGCGCCACTGATTAGTCCTGCAAGAGGGGAGAGAACCCCTTTCCTCAACAATAATAACAATAACAATGGCATCAAGCCTCATCGCCGCGGCTTTGGGGTGAGGAGGGTGTTGTCAAATTATCTCGGGGTGGAGACAAAGACAAAGATATGCAGCAATTCAACCGAGGTTAATCGTTCAAACCCAAGCAACAAAGAAACTGAACACCAAGAAGGTCAGAAGGAATCATGCGCCTTGAAAAACAAGACAAAATGA 1914 0.4425 MDALSKKSEKKRDGSKVCSGGGGDGAKKESLSTDSTAESRENSFSGSSSSSGSTSEEKKAKGSSSPSPPLGWPILKATVSKCAKSDEKESEHKRHLEDSKFTSISSKMSDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKAMWMREMEWLVSVSDHIVELIPSWQTFPDGTKLEVKLDPVNCDFFFDIRDCAVSNFLFLIWCILQVMTCRPRTDIFINLPALRKLDNMLLEILDGFTNTEFWYVDQGIVAPDADGSASFHKTIQRQEEKWWLPVPRVPPTGLSDNSRKQLNQSRECANQILKAAMSINSIALAEMEVPESYLEMLPKNGRTCLGDFIYRYITSDQFSPECLLDCLDLSSEHVALEIANRVEAVIYVWHRRAHSHSRPSPNPNRSTTKSSWEIVKDFMVDADKRELLAERAENILCSLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIAARIDDLLYVDDLTKHSDRFPLVPTVNVVSQQKVSRPSFSVSVSGTPHKAGVGTPGFSPAPLISPARGERTPFLNNNNNNNGIKPHRRGFGVRRVLSNYLGVETKTKICSNSTEVNRSNPSNKETEHQEGQKESCALKNKTK* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0313 637 Gene3D PRONE domain, subdomain 1 374 515 - -
Dod04g0313 637 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 230 609 IPR038937 GO:0005085
Dod04g0313 637 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 33 211 IPR038937 GO:0005085
Dod04g0313 637 MobiDBLite consensus disorder prediction 534 582 - -
Dod04g0313 637 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 230 609 - -
Dod04g0313 637 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 33 211 - -
Dod04g0313 637 MobiDBLite consensus disorder prediction 565 579 - -
Dod04g0313 637 Gene3D PRONE domain, subdomain 1 103 373 - -
Dod04g0313 637 MobiDBLite consensus disorder prediction 1 73 - -
Dod04g0313 637 MobiDBLite consensus disorder prediction 615 637 - -
Dod04g0313 637 ProSiteProfiles PRONE domain profile. 101 516 IPR005512 GO:0005085
Dod04g0313 637 MobiDBLite consensus disorder prediction 606 637 - -
Dod04g0313 637 MobiDBLite consensus disorder prediction 1 17 - -
Dod04g0313 637 MobiDBLite consensus disorder prediction 29 62 - -
Dod04g0313 637 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 230 510 IPR005512 GO:0005085
Dod04g0313 637 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 109 203 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0313 Dod-Chr4 3994912 3998224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0313 - - gmx:100796692 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0313 04 3994912 3998224 Dod08g0745 08 8930869 8933022 PCT