Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0292 ATGATGTCACCACCGAAGGCTTCGCTAGCGTTGGAATTGGAAGAGAGGATGGTGGATTTCAAGCCCTTCTCGGAATCGCAACCCGGATCGTCTTGCTCGCGGTCGATCAGCGAGACCGTGAACTGTTCTCACCGATTCACCATAAAGGGTTACTCTCTTGCGAAAGGGATGGGTGCTGGGAAGTACATAATGAGCGACACGTTCAGCGTTGGTGGGTACGATTGGGCAATTTACTTCTACCCGGATGGGAAAAACCCTGAGGATAACTCCTTGTACGTTTCGGTGTTCATTGCGCTCGCGAGCGAGGGAACGGACGTTAGGGCGTTGTTCAAGTTGACGCTTGTGGATCAGAGCGAGAAAGGGAACGATAAGGTTCATAGCCACTTCGATCGACCCCTTGAGAGTGGGCCTTACACTTTGAAGTACAGAGGCAGCATGTGGGGTTACAAGCGTTTTTTCAGGAGAACGCAATTGGAAAGTTCAGAATATCTGAAAGATGATTGCCTCATCATGCATTGCACTGTTGGTGTTGTCAAAACTCGTTTTGAGGGGTCTAAACAGGGCGTGATTGTGCCACAGTCAGACATGGGCCGAGATTTTAAGGACTTGTTGGGATCTGAAGTTGGTTGTGACATAGTTTTCAAGGTCAATAGTGAAAGCTTCAAAGCTCATAAGTTAATTCTTGCTGCCCGATCTCCTGTGTTTAGAGCGCAGTTTTTTGGACTTGTTGGAGATCCTAGCATAGATGAAGTAGTGGTTCAGGATATTGAGCCTTTTATCTTCAAGGCAATGCTTCTCTTCATTTACACAGACAAACTTCCTGATATATATGAAGTTATGGGCTCAATACCCATGTGCTCATCTACTGTCATGGTGCAGCATCTCTTGGCTGCTGCTGATCTCTATAATCTTGACCGGCTAAAACTGTTGTGCGAATCAAAATTGAGTGAGGAAATCAATACTGACAATGTGGCTACAACGCTTGCCCTGGCTGAACAACACCACTGTCCACAGCTTAAGGCGATCTGTTTAAAATTTATTGCAAATCCAATAAACTTGGCAGTGGTAATGCAGTCTGAAGCTTTTGTGCATTTGAAAGAGAGCTGCCCCTCAATGCTGGTGGAATTGCTGGAGACATTTGCATCAGTGGATGATAACTCAAGCCAGCCGCTGAGCAGGAAAAGAAGTGGCAGCAGCATATATGGACAAGATTTAGCAGATGGGGGTGCAGCTGCTGAGTCAGTTAATCCAATTGGCAGGCGTATCAGGAGGCGGACATAA 1281 0.466 MMSPPKASLALELEERMVDFKPFSESQPGSSCSRSISETVNCSHRFTIKGYSLAKGMGAGKYIMSDTFSVGGYDWAIYFYPDGKNPEDNSLYVSVFIALASEGTDVRALFKLTLVDQSEKGNDKVHSHFDRPLESGPYTLKYRGSMWGYKRFFRRTQLESSEYLKDDCLIMHCTVGVVKTRFEGSKQGVIVPQSDMGRDFKDLLGSEVGCDIVFKVNSESFKAHKLILAARSPVFRAQFFGLVGDPSIDEVVVQDIEPFIFKAMLLFIYTDKLPDIYEVMGSIPMCSSTVMVQHLLAAADLYNLDRLKLLCESKLSEEINTDNVATTLALAEQHHCPQLKAICLKFIANPINLAVVMQSEAFVHLKESCPSMLVELLETFASVDDNSSQPLSRKRSGSSIYGQDLADGGAAAESVNPIGRRIRRRT* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0292 426 ProSiteProfiles BTB domain profile. 210 273 IPR000210 GO:0005515
Dod04g0292 426 CDD MATH 43 175 IPR002083 GO:0005515
Dod04g0292 426 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 39 180 IPR008974 GO:0005515
Dod04g0292 426 CDD BACK_AtBPM-like 317 379 IPR034090 -
Dod04g0292 426 Gene3D Potassium Channel Kv1.1; Chain A 186 314 IPR011333 -
Dod04g0292 426 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 29 390 - -
Dod04g0292 426 CDD BTB_POZ_BPM_plant 196 316 - -
Dod04g0292 426 Pfam MATH domain 58 175 IPR002083 GO:0005515
Dod04g0292 426 SUPERFAMILY TRAF domain-like 38 177 - -
Dod04g0292 426 SMART BTB_4 210 319 IPR000210 GO:0005515
Dod04g0292 426 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 29 390 IPR045005 GO:0016567
Dod04g0292 426 SMART math_3 46 158 IPR002083 GO:0005515
Dod04g0292 426 ProSiteProfiles MATH/TRAF domain profile. 41 175 IPR002083 GO:0005515
Dod04g0292 426 SUPERFAMILY POZ domain 192 317 IPR011333 -
Dod04g0292 426 Gene3D - 318 399 - -
Dod04g0292 426 Pfam BTB/POZ domain 200 317 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0292 Dod-Chr4 3625813 3632318 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0292 K10523 - gmx:100786636 745.347