Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0287 ATGGCAGCTGCAGAAAGCACTTTCAACAGAGCCCCAAGATGGTCCCTCAATGGAATGACCGCTCTAGTCACTGGTGGTACTCGTGGAATTGGGCATGCCGTTGTGGAGGAGTTATGTGGGTTTGGTGCCACTGTCCACACTTGCTCCAGAAACCAAGCTGAGCTCAACAAGTGCTTAGATGAATGGCGTAGTAAGGGCTTTTTCGTTTCTGGGTCAGTGTGTGATGTCTCATCTCAGCCCCACAGAGAGAACCTCATTCGGGATGTTGCCTCCACCTTCAATGGCAAGCTCAACATTTATGTAAACAATGTTGGAGTAAACTTTAGGAAGCCGACAATTGAATACACTGGGGAGGAGTATTCACAAATGATGGCAATTAATTTGGACTCTGCATTCCATCTGTGCCAACTTACATATCCTCTTCTGAAAGCATCTGGAATGGGAAGCATTGTGTTCATCTCATCGATTGCTGGAGTGGTGAGCTTAGGTACTGGATCAATCTATGCAGCAAGTAAAGCTGCAATTAATCAGCTTACAAAGAATTTGGCTTGTGAATGGGCAAAAGACAGCATAAGGAGCAATTGTGTTGTTCCTGCCACTACCAATACGCCGCTTGTAGCGCATTTGCTTCAAAACAAGAAGTATGTGGATGAAATGTTGTCTCGAACTCCTCTTGGACGCATAGCAGAAGCTCAAGAAGTTTCATCCTTGGTCGCTTTCCTTTGTCTGCCTGCTGCCTCTTACATCACAGGACAGGTCATTTCTGTTGATGGAGGGTTAACTGTGAATGGATTTCAACCCATCATGAGAATAACATAA 819 0.453 MAAAESTFNRAPRWSLNGMTALVTGGTRGIGHAVVEELCGFGATVHTCSRNQAELNKCLDEWRSKGFFVSGSVCDVSSQPHRENLIRDVASTFNGKLNIYVNNVGVNFRKPTIEYTGEEYSQMMAINLDSAFHLCQLTYPLLKASGMGSIVFISSIAGVVSLGTGSIYAASKAAINQLTKNLACEWAKDSIRSNCVVPATTNTPLVAHLLQNKKYVDEMLSRTPLGRIAEAQEVSSLVAFLCLPAASYITGQVISVDGGLTVNGFQPIMRIT* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0287 272 PANTHER TROPINONE REDUCTASE 4 269 IPR045000 GO:0016491
Dod04g0287 272 Pfam Enoyl-(Acyl carrier protein) reductase 27 261 - -
Dod04g0287 272 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 269 - -
Dod04g0287 272 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Dod04g0287 272 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Dod04g0287 272 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Dod04g0287 272 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
Dod04g0287 272 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Dod04g0287 272 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Dod04g0287 272 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Dod04g0287 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Dod04g0287 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Dod04g0287 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Dod04g0287 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 263 IPR036291 -
Dod04g0287 272 Gene3D - 2 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0287 Dod-Chr4 3553485 3558869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0287 13 267 Miscellaneous Gene Families AT2G29290 64.202 3.81e-118 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0287 K08081 - gmx:100775806 466.848