Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0286 ATGAAAGACAGTGAGAACAGAGAAGTGAGTGCAAAAATGGCAGAAGCACACGGCAGCAACAGAGGACCAAGATGGTCCCTCAATGGAATGACAGCTCTTGTCACTGGTGGCACCCGTGGGATTGGGCACGCTATAGTGAATGACTTAGCTGGATTTGGAGCTGCTGTGCACACTTGTTCCAGGACCGAATCAGAGTTGAATAAGTGCCTGCAAGAATGGAAAAGTCAGGGCTTTGTGGTTACTGGATCGGTGTGTGATGTTTCATCTGGACCCCAGAGAGAGAAGCTCATTCAAGAAGTGGCCTCCACCTTCGATGGCAAGCTTAACATCTATGTAAACAATGTTGGAACAAATTTTAGGAAGCCAGCCATTGAGTACACTGCCGAAGAATATTCAGAGCTGATGACAGTTAATTTAGACTCCGCATTCCATCTGTGCCAACTTGCACATCCTCTTCTAAAAGCATCTGGAATGGGAAGCATTGTGTTCATTTCATCTGTTGCAGGTGTGGTGAGCTTAGGCACTGGATCTGTTTATGCAGCAAGTAAAGCTGCAATCAATCATCTTACAAAGACTCTTGCTTGTGAATGGGCAAAAGACAACATTAGGAGCAATTGTGTTGCACCATGGGCAACCAGAACACCACTTGTAGAATATTTGTTTCGGAACCAAAAGTTTGTAGATGATATTATGTCTCGAACTCCTCTTAAGCGCATTGCGGAACCGGAAGAAGTGTCATCTTTGGTGGCATTCTTGTGCTTGCCTGCTGCATCTTACATCACTGGACAGGTTATTTCGGTTGATGGAGGATTAACAGTCTTTGGATTTCAACCAAGCATGAGAATTACATGA 852 0.4472 MKDSENREVSAKMAEAHGSNRGPRWSLNGMTALVTGGTRGIGHAIVNDLAGFGAAVHTCSRTESELNKCLQEWKSQGFVVTGSVCDVSSGPQREKLIQEVASTFDGKLNIYVNNVGTNFRKPAIEYTAEEYSELMTVNLDSAFHLCQLAHPLLKASGMGSIVFISSVAGVVSLGTGSVYAASKAAINHLTKTLACEWAKDNIRSNCVAPWATRTPLVEYLFRNQKFVDDIMSRTPLKRIAEPEEVSSLVAFLCLPAASYITGQVISVDGGLTVFGFQPSMRIT* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0286 283 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 166 194 IPR020904 GO:0016491
Dod04g0286 283 PANTHER TROPINONE REDUCTASE 16 280 IPR045000 GO:0016491
Dod04g0286 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 106 117 IPR002347 -
Dod04g0286 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 IPR002347 -
Dod04g0286 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 198 IPR002347 -
Dod04g0286 283 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 16 280 - -
Dod04g0286 283 MobiDBLite consensus disorder prediction 1 23 - -
Dod04g0286 283 Gene3D - 21 275 - -
Dod04g0286 283 Pfam Enoyl-(Acyl carrier protein) reductase 38 272 - -
Dod04g0286 283 PRINTS Glucose/ribitol dehydrogenase family signature 200 217 IPR002347 -
Dod04g0286 283 PRINTS Glucose/ribitol dehydrogenase family signature 153 169 IPR002347 -
Dod04g0286 283 PRINTS Glucose/ribitol dehydrogenase family signature 235 255 IPR002347 -
Dod04g0286 283 PRINTS Glucose/ribitol dehydrogenase family signature 179 198 IPR002347 -
Dod04g0286 283 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Dod04g0286 283 PRINTS Glucose/ribitol dehydrogenase family signature 106 117 IPR002347 -
Dod04g0286 283 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 274 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0286 Dod-Chr4 3548880 3551753 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0286 24 278 Miscellaneous Gene Families AT2G29290 62.257 1.83e-116 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0286 K08081 - gmx:100791265 467.233