Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0285 ATGGCTCTTAGTCTCAACGTCTCATTGTGTTCCACTTCTACTTCTTCTTCCAAACCTTATCATCTCAAAACCTCAACCTCCTCTTCCCATCTTCCTCCTTTCATATTCAACTTCAACCAACAACTCTATCAAAGGCATAGCCACAAAGCAGTAGGAGCATCTCATAAGCTCACATTTTCATGGGGTGAATCCGTGTCTAGTGCCGCCCTTGTTGCTCTCCTCTCTGCTTCGTTGTTCTTTGTTGATCCTGCACTTGCATTCAAGGGTGGAGGCCCATATGGGCAAGAGGTGACAAGAGGACAAGATCTATCTGGGAAGGATTTCAGTGGCAAGACTCTGATCAAGCAAGACTTCAAAACGTCCATACTGCGACAAGTCAATTTTAAAGGTGCAAAGTTGATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTCTCGGATGCCGATCTTAGAAGTGCAGATTTTTCCTTGGCAAATGTGACAAAGGCAAATTTAACAAATGCTAACTTGGAAGGTGCACTTGCAACAGGAAATACATCTTTTAGGGGATCAAATATTACAGGCGCAGACTTCACGGACGTACCACTAAGAGAAGATCAACGTGAATATCTCTGCAAAGTTGCAGATGGAGTGAACCCAACAACTGGAAATGCTACGCGGGATACATTGCTGTGCATCTTTGCTGCTGATCTGTTCTGTGCCCCAAACATTTTGTGTCTGTGTTACGGGAAAGGTGTGGAAACATTGTTTAGTTACTGTATTGATGATTTGGGAGTCGGTGGCTTTTGTTTATCTCAGCATTTTGTTGCTAAGTGTCGACCTGGTCCGTTTGGCAAAATGGGACATCTAAAGATGCAAATGCAAACTGGTGTCAATGCAATAGAGGATCAATCTGAGCAACGTGGTGCTGGATATACTAATGAAACTACCATAGCATGCATGATCAATGCTGAAATTGGAGCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGACCAATCGGAGCACTTTCTCGTTCAGTCTTTAAAGGCATTAAGGAGGAAGATTTTCTCATGGCAGAATAAATGGCATTCCATCAACCCTGCCTTGTATCTCCAACCTTTTCTGGATGTAATTCAATCAGATGAAACTGGAGCACCAATTACTGGTGTTGCTCTGTCATCTGTTTACAAGATCTTAACCTTGGATGTGATTGATCAAAACACTGTCAACATTGGGGATGCCATGCACTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAGGTGACTGACCCTGGATCAGAAGAAGTGGTATTAATGAAGATATTACAAGTTCTTTTAGCATGTGTGAAAAGTAAAGCATCTGTAATGCTGACTAACCAACACATTTGCACCATAGTAAATACTTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTGCAGCGGATAGCACGGTACACAATGCATGAACTTGTTAGGTGTATATTCTCTCACCTTCAGGATATAGACAACACAGAGTACTCATTGGTGAATGGGAGCTCTTCTTTAAAACAAGAGACCAGTGGACAAAATAATGAGTATACTTTGGCTAGCAGGCATTTGGATAATGGAAGCCAGAATCCAGCATCTAATGGTCAACCATTAGGAATTGCTTCCAATACTGTAAGTGTTGTGACATCAACTATAATGGATGAAAACACAGCTATTGCTAGCAGTGGCGAGGAGACTGATCCGCATGAATTGGAGCAAATGACTGAACCATATGGAGTTCCCTGTATGGTAGAAATATTTCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCATATGGGAATGAATTCTAGATCAAACACCATAACATTTGATGAAGATGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATAGAGTTGGGAGGGCCTTCCTTTCGCCGTCATCCAAGACTACTGAGCTTAATTCAGGATGAACTATTCCGCAATCTTATGCAATGTGGTTTGTCAATGAGTCCTCTTGTTCTCTCTATGGTGTGCAGCATTGTTCTCAGTTTGTATCACCATCTTTGTATGGAAATCAAGTTACAGCTGGAAGCATTCTTTTTTTGTGTAATTTTGAGGCTTGCACAAAGAAAATATGAGGCTTCATATCAGCAACGGGAGGTTGCCGTGGAGGCCCTTGTTGATTTTTGCAGGCAAAAGACATTCATGGTAGAGATGTATGCTAATTATGACTGTGACATAACTTGCAGTAATGTTTTTGAAGACATTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTAAACGATCCATTGTCTTCCATGCAAATTCTTGCTTTGGATGGTCTTATTGCCGTCATGGAGGGAATGGCTGAAAGGATAGGCAATGGATCTGTAACTTCAGAACATTCTCCTTCGAATTTTGAAGAGTATATTCCATTCTGGCTGGAAAAGTGTGAGAACTTTGGTGATCCAAATGATTGGGTTCCTTTTGTCTGCCGAAGAAAGTACTTGAAGAGAAGATTGATGATTGGCGCTGATCACTTCAATCGTGATGTTAAGAAAGGTCTCGAGTTTCTCCAAGGAACACATCTTTTGCCAGATAAACTCGATCCACAAAGTGTTGCCTGCTTTTTGAGATATACTGCTGGGTTGGATAAGAATCTCATTGGTGATTTCTTAGGAAATCATGATGAATTCTGTATTCAGGTTCTCCATGAATTTGCTGGAACATTTGATTTCCAAGACATGACCATAGACACAGCCTTGCGTCTATTTTTGGAGACTTTTAGGCTTCCTGGAGAGTCACAGAAGATACATAGAGTGCTTGAAGCTTTCTCTGAAAGATATTATGAGCAATCACCACATATCCTAGTTAACAAGGATGCTGCTCTCGTGTTATCATACTCAATTATATTGCTTAATACAGATCATCACAATGTGCAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCAGGAATAATAGGCGTATTAATGGTGGCAATGATCTGCCTCGTGAATTCCTGTCAGAGATTTACCATTCAATTTGTAAGAATGAAATCCACACAACCCCTGAACCAGGTTTTGGATTTCCTGAAATGACCCCAAGCCGGTGGATTTCTCTAATGCACAAGTCCAGGAAAACTGCTCCATTTATTGTATCCGATTCCAGATCATACCTTGATTATGATATGTTTGCCATATTGTCAGGCCCAACAATTGCTGCCATTTCTGTGGTACTTGATAATACTGAAAATGAAGAGATATACCAAACTTGTATGGATGGATTCTTAGCTGTCGCCAAGATATCAGCTTATTACCATCTTGAAAATGTACTTGATGATTTGGTTGTGAGTCTCTGCAAGTTCATTACCATTTTGGATCCATCCTCAGTTGAGGAATCTGTCCTAGCCTTTGGAGATGACACAAAAGCAAGAATGGCAACTGAAACAGTTTTCACCATTGCAAATAGGTACGGTGATTACATCCGCACTGGGTGGATGAATATTCTTGATTGCATCTTAAGATTGCACAAGTTAGGCCTTCTTCCTACTTGTTTGGCCAGTGATGCAGCTGATGATTCAGAGCTTTCTACAGAAACTGCACATGGGAAGCCTAATTCAAACTCCTTGTCATCAACTCATCTTCCATCTATTAGTACTCCAAAGAGATCCTCTGGATTGATGAGTAGGTTTAGTCAACTCTTATATCTTGGCACTGAAGAGCCTAGGTCGGTACCAACTGAAGAACAACTCGTTGCTCATCAGCAGGCCATGCAAACAATTCAGAAGTGTCACATTGGTACAATATTCGCTGAGAGTAAATTTCTTCAAGCTGAATCTCTATTGCAGCTTGCAACAGCACTCATTAATGCTGAAGGAATACTTCGTAAAGATAACAACTTATCTGAGTATGAAGATACTTCAGTTTTCTGCCTGGATTTGCTGGTAGCAATCACTCTGAATAACAGGGACAGAATTGGACTTCTATGGAAGGATGTTTATGAGCACATTTCCAATATTGTTCAGTCAACTGTGATGCCCTCTGCACTGATGGAAAAGGCTGTTTTCGGGCTTCTAAAGATTTGTCATCGCTTACTTCCCTACAAAGAGAACATTGCTGATGAACTTTTGAGGTCTCTGCAACTTATCTTGAAGCTTGATGCTCGGGTTGCAGATGCATATTATGAGCAGATCACTCAGGAAGTCAGTCGCCTTGTGAAGGCAAATGCTTCTCATATTAGATCTCAGCTAGGATGGCAGACAATCACGTCACTTCTTTCCATTACTGCTCGACACCAGGAATCGTCTGCGGCTGGATTTGATGCACTGTTGTTCATTATGTCTGATGGAGCCCACTTGCTTCCTGCGAATTATATTCTCTGTGTAGATGCTGCAAGGCAGTTTGCTGAGTCTCGCCTAGGACAGGTAGAGCGGTCTGTAGTCGCACTTGATCTTATGGCTGGTTCTGTCGATTGTTTGGAAAAATGGGCCAGTGATGCCACACGGGTAGCGAAAGAAGAGGAAGTGGAGATGATGTTAAAGGATATTGGAGAAATGTGGTTGAGACTAGTGCAGGGATTAAGCAAAGTAATTTTGGACCAGAGAGAAGAGGTTAGAAATCATGCGCTGTTATCTTTGCAGAAGTGCTTGACACGACCTATTGGGAGTCATGTCCTGCCTGATTTGTGGCTACAGTGTTTTGATCAAGTGATCTTCACCGTGATTGACAACCTGTTCGAAATTGCTGAGGCATACTCTCAGAAGGAATACAGGAACATGGAAGGGACACTTATTCTTGCTTTGAAGCTCTTGTCGAAAGTTTTCCTCCAATTACTCCAGAAACTATCACAATTGACAGAATTCTGCAAACTATGGGCCGGCGTGCTAGGCCGTACGGAAAAATATATGAAGGTGAAAGTTAAGGGAAGGAGAAGTGAGAAGCTTCTGGAGCTTGTGCCTGAGCTTCTGAAGAACACTTTGCTTGTTATGAAATCAGGGGGCGTACTAGTGCGGAGCAGCAGTGCAGGGGAAAATAGTTTGTGGGAATTGACATGGCTAAATATGAAGAATATCGCTCCGTCGTTGCAGTCTGAGGTGTTCCCTGAAGGAGATTCAGAACATTTGCAGTCGCAGAACAAACAGATAAAAAAAATTGATGCCAACACTATTGTTCCTGCAATAGTGAGCCAAGATGGTGCTGGTGTTGGTTAA 5244 0.417 MALSLNVSLCSTSTSSSKPYHLKTSTSSSHLPPFIFNFNQQLYQRHSHKAVGASHKLTFSWGESVSSAALVALLSASLFFVDPALAFKGGGPYGQEVTRGQDLSGKDFSGKTLIKQDFKTSILRQVNFKGAKLIGASFFDADLTGADLSDADLRSADFSLANVTKANLTNANLEGALATGNTSFRGSNITGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLLCIFAADLFCAPNILCLCYGKGVETLFSYCIDDLGVGGFCLSQHFVAKCRPGPFGKMGHLKMQMQTGVNAIEDQSEQRGAGYTNETTIACMINAEIGAVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKALRRKIFSWQNKWHSINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNIGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVMLTNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQDIDNTEYSLVNGSSSLKQETSGQNNEYTLASRHLDNGSQNPASNGQPLGIASNTVSVVTSTIMDENTAIASSGEETDPHELEQMTEPYGVPCMVEIFHFLCSLLNVVEHMGMNSRSNTITFDEDVPLFALTLINSAIELGGPSFRRHPRLLSLIQDELFRNLMQCGLSMSPLVLSMVCSIVLSLYHHLCMEIKLQLEAFFFCVILRLAQRKYEASYQQREVAVEALVDFCRQKTFMVEMYANYDCDITCSNVFEDIANLLSKSAFPVNDPLSSMQILALDGLIAVMEGMAERIGNGSVTSEHSPSNFEEYIPFWLEKCENFGDPNDWVPFVCRRKYLKRRLMIGADHFNRDVKKGLEFLQGTHLLPDKLDPQSVACFLRYTAGLDKNLIGDFLGNHDEFCIQVLHEFAGTFDFQDMTIDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILVNKDAALVLSYSIILLNTDHHNVQVKKKMTEEDFIRNNRRINGGNDLPREFLSEIYHSICKNEIHTTPEPGFGFPEMTPSRWISLMHKSRKTAPFIVSDSRSYLDYDMFAILSGPTIAAISVVLDNTENEEIYQTCMDGFLAVAKISAYYHLENVLDDLVVSLCKFITILDPSSVEESVLAFGDDTKARMATETVFTIANRYGDYIRTGWMNILDCILRLHKLGLLPTCLASDAADDSELSTETAHGKPNSNSLSSTHLPSISTPKRSSGLMSRFSQLLYLGTEEPRSVPTEEQLVAHQQAMQTIQKCHIGTIFAESKFLQAESLLQLATALINAEGILRKDNNLSEYEDTSVFCLDLLVAITLNNRDRIGLLWKDVYEHISNIVQSTVMPSALMEKAVFGLLKICHRLLPYKENIADELLRSLQLILKLDARVADAYYEQITQEVSRLVKANASHIRSQLGWQTITSLLSITARHQESSAAGFDALLFIMSDGAHLLPANYILCVDAARQFAESRLGQVERSVVALDLMAGSVDCLEKWASDATRVAKEEEVEMMLKDIGEMWLRLVQGLSKVILDQREEVRNHALLSLQKCLTRPIGSHVLPDLWLQCFDQVIFTVIDNLFEIAEAYSQKEYRNMEGTLILALKLLSKVFLQLLQKLSQLTEFCKLWAGVLGRTEKYMKVKVKGRRSEKLLELVPELLKNTLLVMKSGGVLVRSSSAGENSLWELTWLNMKNIAPSLQSEVFPEGDSEHLQSQNKQIKKIDANTIVPAIVSQDGAGVG* 1748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0285 1747 ProSiteProfiles SEC7 domain profile. 840 1029 IPR000904 GO:0005085|GO:0032012
Dod04g0285 1747 MobiDBLite consensus disorder prediction 1211 1235 - -
Dod04g0285 1747 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 293 1730 - -
Dod04g0285 1747 Gene3D - 86 233 - -
Dod04g0285 1747 SUPERFAMILY ARM repeat 443 1615 IPR016024 -
Dod04g0285 1747 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 601 762 IPR032691 -
Dod04g0285 1747 SUPERFAMILY Pentapeptide repeat-like 95 200 - -
Dod04g0285 1747 SUPERFAMILY Sec7 domain 845 1033 IPR035999 GO:0005085|GO:0032012
Dod04g0285 1747 CDD Sec7 848 1031 IPR000904 GO:0005085|GO:0032012
Dod04g0285 1747 MobiDBLite consensus disorder prediction 1 27 - -
Dod04g0285 1747 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 293 1730 - -
Dod04g0285 1747 MobiDBLite consensus disorder prediction 1207 1235 - -
Dod04g0285 1747 Pfam Sec7 domain 848 1031 IPR000904 GO:0005085|GO:0032012
Dod04g0285 1747 Gene3D - 841 923 - -
Dod04g0285 1747 Pfam Pentapeptide repeats (8 copies) 121 159 IPR001646 -
Dod04g0285 1747 SMART sec7_5 844 1031 IPR000904 GO:0005085|GO:0032012
Dod04g0285 1747 Gene3D - 924 1038 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0285 Dod-Chr4 3532463 3544677 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0285 K18443 - gmx:100789674 2336.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0773 08 9191651 9198731 Dod04g0285 04 3532463 3544677 PCT