Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0284 ATGGGGCGTCTAAAGCTGCAGGCTGGTATCAACGCAATAGAGGAGGAGGAGCCTGAGGAATGCGATGTGTCCTGTCCTAACAAGACAACTTTAGCATGCATGATTAATTCGGAAATTGGTGCTGTCTTGGCAGTCATGCGGAGAAATGTAAGATGGGGAGGCCGTTATATGTCCGGGGATGACCAGCTGGAGCACTCTCTCATTCAGTCTTTGAAGGCGTTAAGGAGACAAATCTTTTTGTGGCACCATCAGTGGCAAGCTATCAATCCTGCTTTGTATCTCCAGCCGTTTTTGGAAGTGATTCGATCTGATGAGACTGGCGCACCGATTACTGGTGTTGCTTTGTCATCTGTTTACAAGATCTTAACTCTGGACGTGATTGATCAAAATACGGTCAATGTTGAGGATGCCATGCACTTGGTGGTTGACGCTGTCACTAGCTGCAGATTTGAGGTGACTGATCCTTCTTCAGAAGAAGTCGTTTTAATGAAGATACTACAAGTTCTCCTAGCATGTATGAAAAGTAAAGCATCTGTAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGTATAGTTCATCAAGCGGGAACTAAGGGTGAGTTGTTGCAGCGGATAGCACGGCAGTCAATGCATGAACTCGTTAGGTGTATTTTTTCTCACCTTCAAGATGTTGACAACACAGACCATGCATTGGTTAATGGAACCTCTAATTTGAAACAGGAGACTGGGGGGCTTAATAATGAGTATGCTTTCGGAAGTAGACAATTGGAGAATGGGAGCATGATCTCTGAATATGATAATCAGTCGTTGACCACAAACTTTGCTCCCAATGCTGCAACTGTTGTGATGGGAACTGTGATGGACGAACACACAGCCATTGCTATCAGTGGCAAGGAGGGTGTATCATATGACGTGCATCTCATGACTGAACCATATGGTGTTCCTTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAATGTTGTTGAGCATATGGGAGTGGGTCCTAGATCAAACACTATAGCATTTGATGAGGACGTGCCTCTGTTTGCCTTAACTTTGATTAATTCTGCTATAGAACTTGGAGGGCCTTCTATTCGCTGTCACCCAAGGTTGCTGAGCTTAATTCAGGATGAATTGTTTCGCAATCTGATGCAATTTGGTTTGTCAGTGAGTCCACTTATACTTTCAATGGTGTGTAGCATTGTGCTCAATCTGTATAATCATCTCCGTACTGAACTCAAATTACAGCTAGAAGCTTTCTTTTCTTGTGTCATTTTGAGGCTTGCACAGAGCAGATATGGGGCTTCATACCACCAGCAAGAAGTAGCCATGGAGGCCCTTGTTGACTTCTGCAGGCAAAAGACATTTATGGTAGACATGTATGCCAACTTTGACTGTGACATAACTTGTAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTCAATTGTCCATTGTCTGCCATGCATATTCTTGCCTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCTGAAAGGATAGACAATGGATCTGTAAGTTCAGAATATTCCCCAGTGAACCTTGAAGAGTATACTCCATTCTGGATGGTTAAATGTGAGAATTATAGTGATCCAAATCATTGGGTTCCTTTTGCCCGCCGAAGAAAGTACATAAAGAGAAGATTGATGATTGGAGCTGACCACTTTAATCGTGATCCTAAAAAAGGTCTAGAGTTTCTCCAGGGAACACATCTTTTGCCTGACAAGCTTGACCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCTGGGTTAGATAAGAATCTTGTTGGTGATTTCCTCGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTTCAAGAAATGAACTTAGATACAGCCCTGCGTCTATTTTTGGAGACATTCAGACTGCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAGTCGCCACACATCCTTGCTAACAAGGATGCTGCTCTTGTGTTGTCATACTCAATGATAATGCTCAACACAGACCAGCATAATGTTCAGGTTAAAAAGAAGATGACAGAGGAGGATTTTATCAAGAATAATAGGCATATAAATGGGGGCAATGATCTACCTCGAGAATTCCTGTCAGAGATTTACCATTCAATTTGTAAGAATGAAATCCGCACAACCCCTGAACAAGGTGTTGGGTTTCCTGAAATGACACCAAGTCGATGGATTGATCTAATGCACAAGTCAAAAAAAACGGCTCCGTTTATTGTATCTGATTCCAAGGCCTACCTTGATCATGATATGTTTGCCATAATGTCAGGTCCAACAATTGCTGCCATCTCTGTGGTATTTGACCATGCTGAACATGAAGAGGTATACCAAACATGTACAGATGGATTCTTAGCTGTTGCTAAGATTTCAGCTTGCCATCATCTTGAAGATGTTTTGGATGATCTGGTTGTGTCTCTCTGCAAGTTCACTACACTTTTGAACCCTTCATCAGTTGAGGAACCTGTCCTTGCCTTTGGAGATGACATGAAGGCAAGAATGGCAACTGTGACCGTATTCACTATTGCAAACAGGTATGGTGATTACATACGCACAGGCTGGCGAAATATTCTTGATTGCATCTTAAGACTACACAAGCTTGGTCTTCTTCCTGCCCGCGTTGCCAGTGATGCAGCTGACGAGTCAGAGCTTTCTACTGAAACTGTGCATGGAAAGCCTGTTACAAATTCTTTATCCTCAGCTCATATGCCATCTATTGGCACTCCAAGGAGATCTTCAGGATTGATGGGGAGGTTTAGTCAACTCTTATCTCTTGATACTGAAGAGCCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACCCTACAAACAATACAGAAGTGTCACATTGACAGCATATTCACTGAAAGTAAGTTTCTGCAAGCTGAATCTCTTTTGCAGCTTGCAAGAGCACTCATTTGGGCTGCAGGGCGACCTCAGAAGGGGAACAGCACACCTGAAGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGACAGAATTGGGATTCTTTGGCAAGGTGTGTATGAGCACATATCCAATATTGTTCAGTCAACTGTAATGCCCTGTGCCCTGGTAGAGAAGGCTGTTTTTGGACTCCTACGGATTTGCCAAAGGTTGCTTCCATACAAAGAAATGATTGCGGATGAACTTCTGAGGTCATTGCAACTTGTCTTGAAGCTTGATGCCCGGGTTGCTGATGCATACTGTGAGCAGATTACTCAGGAAGTCAGTCGCCTTGTGAAGGCAAATGCTTCTCATATAAGATCTCAATTAGGATGGCGTACAATTACATCACTACTTTCCATCACAGCAAGACACATAGAAGCATCAGAGGCTGGGTTTGATGCACTATTGTTCATAATGTCCGATGGTGCCCACCTGCTTCCAGCTAATTTTGTTCTCTGTTTAGATACCGCAAGGCAGTTTGCTGAGTCTCGCGTTGGACAAGCAGAGCGATCTATACGGGCACTAGATGTCATGGCTGGGTCTGTAAATTGCTTGGCTCAGTGGACTAGTGAGGCCAAGGAAGCAATGGAGGAGGAACAAATGTCTAAGTTGTCGCAGGATATTGGAGAGATGTGGTTGAGATTAGTCCAGGGCCTAAGGAAGGTGGGTTTAGACCAGAGAGAGGACGTTAGAAATCATGCTTTATTATGTTTGCAGAATTGCTTGACAGGAGCCGATGGCATTTATCTCCCTCATGGTTTGTGGTTACAGTGTTTTGATATTGTGATCTTCACTCTACTTGATGACCTGCTTGAGATTGCACAAGGACACTCTCAGAAGGAGTACCGCAACATGGAAGGCACACTTATCCTTGCGATGAAGTTGTTGTCTAAAGTTTTTCTTCAATTACTCCCTGATTTATCACAACTGACAACCTTCTGCAAGTTATGGTTAGGTGTGCTGAGCAGAATGGAAAAATATATGAAGGTGAAGATTAGAGGAAAAAGAAGTGAGAAGCTTCAAGAGACAGTACCTGAGCTTCTCAGAAACTCCTTGCTTGTTATGAAGATGAGGGGTATACTGGCACAAAGGAGTGCCTTGGGTGGTGATAGTCTTTGGGAACTAACCTGGCTGCATGTGAATAACATTTCACCGTCATTGCAACTTGAGGTATTCCCCGATCAGGATTCCGACCATTTGCAGAAGAGACAGAGTGAATCAGTTGGAGGTTTTGTGCCTGATGAAATGGGTTCTGTTCCTTCAAGTGAAACAGAAAGCCACAAAGACGCTGGCATTGCTGGTTAA 4419 0.4315 MGRLKLQAGINAIEEEEPEECDVSCPNKTTLACMINSEIGAVLAVMRRNVRWGGRYMSGDDQLEHSLIQSLKALRRQIFLWHHQWQAINPALYLQPFLEVIRSDETGAPITGVALSSVYKILTLDVIDQNTVNVEDAMHLVVDAVTSCRFEVTDPSSEEVVLMKILQVLLACMKSKASVMLSNQHVCTIVNTCFRIVHQAGTKGELLQRIARQSMHELVRCIFSHLQDVDNTDHALVNGTSNLKQETGGLNNEYAFGSRQLENGSMISEYDNQSLTTNFAPNAATVVMGTVMDEHTAIAISGKEGVSYDVHLMTEPYGVPCMVEIFHFLCSLLNVVEHMGVGPRSNTIAFDEDVPLFALTLINSAIELGGPSIRCHPRLLSLIQDELFRNLMQFGLSVSPLILSMVCSIVLNLYNHLRTELKLQLEAFFSCVILRLAQSRYGASYHQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSAMHILALDGLIAVIQGMAERIDNGSVSSEYSPVNLEEYTPFWMVKCENYSDPNHWVPFARRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQEMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIKNNRHINGGNDLPREFLSEIYHSICKNEIRTTPEQGVGFPEMTPSRWIDLMHKSKKTAPFIVSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCTDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSTETVHGKPVTNSLSSAHMPSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKEMIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHIEASEAGFDALLFIMSDGAHLLPANFVLCLDTARQFAESRVGQAERSIRALDVMAGSVNCLAQWTSEAKEAMEEEQMSKLSQDIGEMWLRLVQGLRKVGLDQREDVRNHALLCLQNCLTGADGIYLPHGLWLQCFDIVIFTLLDDLLEIAQGHSQKEYRNMEGTLILAMKLLSKVFLQLLPDLSQLTTFCKLWLGVLSRMEKYMKVKIRGKRSEKLQETVPELLRNSLLVMKMRGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPDQDSDHLQKRQSESVGGFVPDEMGSVPSSETESHKDAGIAG* 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0284 1472 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1440 - -
Dod04g0284 1472 MobiDBLite consensus disorder prediction 930 949 - -
Dod04g0284 1472 Gene3D - 643 759 IPR023394 -
Dod04g0284 1472 ProSiteProfiles SEC7 domain profile. 559 748 IPR000904 GO:0005085|GO:0032012
Dod04g0284 1472 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 11 1440 - -
Dod04g0284 1472 SMART sec7_5 563 750 IPR000904 GO:0005085|GO:0032012
Dod04g0284 1472 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 320 481 IPR032691 -
Dod04g0284 1472 Pfam Sec7 domain 567 750 IPR000904 GO:0005085|GO:0032012
Dod04g0284 1472 CDD Sec7 567 750 IPR000904 GO:0005085|GO:0032012
Dod04g0284 1472 SUPERFAMILY Sec7 domain 564 753 IPR035999 GO:0005085|GO:0032012
Dod04g0284 1472 MobiDBLite consensus disorder prediction 923 956 - -
Dod04g0284 1472 SUPERFAMILY ARM repeat 162 1336 IPR016024 -
Dod04g0284 1472 Gene3D - 560 642 - -
Dod04g0284 1472 MobiDBLite consensus disorder prediction 1437 1472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0284 Dod-Chr4 3519878 3525808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0284 K18443 - gmx:100780239 2720.27