Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0279 ATGGCTGCTGTTAGGGATATTGGGGTGTCTGAATTCCTGCAGGGAACGTGCAGGCAGACTTTGTTTCTGGGGAAGAAGTCTCAGAGGCAGAGGAGTCATTTGCTTTGGGGTACACTTTGGAACAGGAACCGGGTTCAGGGTTTGACAAGGAAAGCTTTGCCTTTAAGGTGCCATGCTCAGGAAAATCCCAGAGCTGCAGTATCCGGGGGTGTGACCAGTTCAGTAGAGGAGCAATCTGGTTTGGTTGAGAGGCCTGCCTCGGAAGTTTTTCATTTGTACCGTGTCCCTTTTATCCAAGAAAATGCAGCTGCTGAACTTCTCAAGGAAGCTCAAATGAAAATCTCGAATCACATTGTGGACCTACAGACAGAGCAGTGTTACAATATTGGTCTTGTTTCACAGCTTTCAAGCAGAAAGCTTTCGGTCCTTAAATGGCTTCTCCAAGAAACATTTGAGCCTGAGAATCTGGGAACGGAGAGCTTTCTTGAGAAGAGGAAGAAGGAGGGTTTGAGGACTGCTATAATAGAGGTTGGCCCCAGGTTGTCATTTACCACAGCATGGTCAACAAATGCTGTGGCAATTTGCCAAGCCTGTGGTTTGACTGAAGTGACCCGCCTGGAGCGATCAAGGAGGTACTTGTTGTACACCACAAGTGAATTACAAGATTATCAAATCAATGAATTTGCATCTATGGTACATGATAGAATGACTGAATGTGTTTATACTCAGAAGTTAACATCCTTTGAGACCAATGTTGTTCCAGAGGAAATTCGTTATATACCTGTGATGGAGAGGGGAAGAAAGGCATTAGAAGAGATTAATCAGGAGATGGGTTTAGCCTTTGATGACCAGGATTTAGAATACTACACTCAACTTTTCAGAGAAGATATCAAACGTAACCCAACAAATGTGGAGTTATTTGATATTGCACAGTCCAACAGTGAGCATAGCAGGCACTGGTTTTTTACTGGAAAGATTTTCATTGATGAACAGCTCATGAATAGGACTCTTATGCAAATTGTGAAAAGTACTTTACAGGCCAATCCAAATAACTCTGTTATTGGCTTTAAGGATAACTCAAGTGCAATCAGGGGTTTCCCAGTAAAACAGTTACGACCAGTTCAGCCTGGTTCAGCATGTCCATTAGACACAATGGCACGTGAGTTAGATATCTTGTTTACAGCTGAAACACATAATTTTCCATGTGCAGTGGCACCATATCCTGGTGCCGAAACAGGCGCAGGAGGTCGCATTAGGGATACACATGCAACAGGAAGGGGGTCCTTTGTCCAGGCAGCTACAGCTGGTTATTGTGTTGGGAACCTCAACACACCAGGGTTTTATGCTCCATGGGAAGATACATCCTTTACTTATCCATCAAATTTGGCCTCACCTTTGCAGATCCTTATAGATTCCAGTAATGGTGCATCTGACTATGGGAACAAATTTGGAGAGCCATTGATCCAGGGCTTCTGCAGAACCTTTGGAATGAGACTTCCTAGTGGGGATAGGCGGGAATGGTTGAAGCCAATCATGTTTAGTGCGGGCATTGGGCAGATTGATCACCATCATATATCAAAGGGAGAGCCTGAGATTGGAATGTTGGTGGTTAAGATTGGAGGCCCTGCTTATCGTATTGGGATGGGAGGCGGGGCAGCCTCAAGCATGGTCAGTGGGCAGAATGATGCAGAGCTTGATTTCAATGCTGTGCAGCGTGGGGATGCTGAGATGGCACAAAAACTGTATCGTCTTGTTCGCGCCTGTATTGAGATGGGGGATAAAAATCCAATTATCAGCATTCACGACCAGGGAGCTGGTGGTAACTGCAACGTTGTAAAGGAAATCATATACCCAAAGGGTGCTGAGATAGATGTCCGAGCAATTGTGGTTGGTGATCACACAATGTCTGTTCTGGAAATTTGGGGTGCAGAGTATCAGGAGCAAGATGCAATCTTGGTGAAGCCTGAAAGTCATGAGCTCTTACAGTCTATCTGTCAGAGGGAAAAGGTTTCAATGGCTGTGATTGGCACTATTAGTGGTGATGGGCGTGTCGTGCTAGTGGATAGCTTAGCAACTCAGAAGTGTCTATCAAATGGACTTCCTCCACCTTCCCCTGCTGTGGATCTTGAACTGGACAAAGTCCTTGGTGACATGCCTAAGAAATCTTTTAAATTTAATCGGGTTGTTTATGAAAGGGAGCGACTTGATGTTGCCCCTGAGATCACTGTAATAGATTCTCTGAAGAGGGTATTGAGTTTGCCATCTGTCTGTTCAAAACGCTTCTTAACAACAAAAGTTGATAGATGTGTCACTGGTCTTGTAGCACAGCAGCAAACTGTTGGCCCTTTGCAGATTCCTATTGCTGATGTTGCTGTTACAGCTCAAACTTTTACTGGTTTGACTGGTGGTGCATGTGCCATTGGGGAGCAACCAATCAAAGGTCTGTTAGACCCCAAAGCAATGGCGCGGTTGGCTGTTGGAGAAGCGCTCACAAATCTTGTATGGGCTAAGGTCACTTCCCTTTCTGATGTTAAGGCAAGTGGTAATTGGATGTATGCTGCCAAGCTTGACGGGGAAGGACCTGCCATGTACGATGCTGCTATATCTTTGTCTGAAGCAATGATTGAACTTGGTATTGCTATTGATGGAGGGAAGGACAGTCTTTCTATGGCAGCCCATGCTGGAGGAGAAGTTGTTAAGGCTCCCGGAAATCTCGTAGTTAGTGTTTATGTAACTTGTCCTGATATAACAAAAACAGTGACCCCTGATTTAAAACTTGAAGATGATGGTGTTTTGCTTCACATTGATTTGTCAAAGGGGAAGCGGCGGTTAGGTGGATCTGCTCTTGCTCAAGCGTTTGACCAAGTTGGGAACGAGTGTCCTGATCTTGATGACGTTCCTTACCTTAAAAAGGTCTTTGAAGCTATTCAAGACCTTCTTACTGATGAACTGATCTCTGCTGGTCATGACATCAGTGATGGTGGGCTGCTAGTTTGTGCCTTAGAGATGGCATTTGCTGGCAATCGTGGATTTATTTTGGACTTGCCTTCACGAGGTAATAGCCTTTTCCAAACACTCTATGCAGAAGAGCTTGGGTTAGTTGTTGAGGTAAGCCAGAAAAAACTGCCTGTTGTAGTGGATAAATTGAAGAGTGTGGGAGTTTTTGCTGAGATCATAGGTCAAGTGACTGCTAGTCCATCTATAGAAGTCAAGGTTGATGGGCTGACTTGGTTACAAGAAAAAACTTCCATCCTCAGGGACATGTGGGAAGAAACCAGTTTCCAGCTGGAAAAGTTCCAAAGATTGGCGTCTTGCGTCGATATGGAGAGAGAAGGACTGAAACATCGATATGAGCCCTCGTGGAAACTGTCCTTTACACCTTTCTTCACTGATGAGAAGTACTTGTCCACAACTTTAAAACCTAAAGTAGCTGTGATTAGAGAAGAAGGAAGCAACGGAGATAGAGAAATGGCGGCAGCATTCCATGCTGCTGGTTTTGAACCGTGGGATGTTACTATGTCAGACCTTCTTAATGGTGTGATCTCTTTGCAAGAGTTCCGTGGAATTGTGTTTGTCGGTGGATTTAGCTATGCTGATGTACTTGATTCTGCGAAAGGCTGGGCTGCTTGCATAAGATTCAACGAGCCCGTCTTGAAACAATTCCAGGACTTCTACAAGCGTCCAGACACTTTCAGTCTTGGTGTATGCAATGGTTGTCAGCTAATGGCTTTGTTGGGATGGGTACCGGGCCCGCAGGTTGGTGGTGTGCTTGGTGCTGGCGGCGACCTATCGCAGCCTAGGTTCATTCACAATGAATCAGGGCGGTTTGAATGCCGCTTTACAAGTGTGACAATAAACGAATCACCAGCTATGATGTTCAAGGGTATGGAGGGCAGTACATTGGGAGTATGGGCTGCTCACGGGGAGGGAAGAGCTTATTTCCCGGATGAAGGCGTGTTGGATCGCATAGTTCATTCGGATTTAGCTCCTGTAAGATATTGTGATGATGGCGGCGATCCAACAGAGATCTATCCTTTCAATGTGAATGGCTCTCCCTTAGGGGTGGCAGCTATTTGTTCTCCAGATGGGAGGCATCTTGCCATGATGCCTCATCCGGAGCGTTGCTTCTTGATGTGGCAGTTCCCATGGTATCCAAAGCATTGGGATGTGGACAAGAAGGGGCCTAGCCCGTGGTTGCGCATGTTCCAGAATGCAAGAGACTGGTGTTCCTGA 4233 0.4562 MAAVRDIGVSEFLQGTCRQTLFLGKKSQRQRSHLLWGTLWNRNRVQGLTRKALPLRCHAQENPRAAVSGGVTSSVEEQSGLVERPASEVFHLYRVPFIQENAAAELLKEAQMKISNHIVDLQTEQCYNIGLVSQLSSRKLSVLKWLLQETFEPENLGTESFLEKRKKEGLRTAIIEVGPRLSFTTAWSTNAVAICQACGLTEVTRLERSRRYLLYTTSELQDYQINEFASMVHDRMTECVYTQKLTSFETNVVPEEIRYIPVMERGRKALEEINQEMGLAFDDQDLEYYTQLFREDIKRNPTNVELFDIAQSNSEHSRHWFFTGKIFIDEQLMNRTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVQPGSACPLDTMARELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNTPGFYAPWEDTSFTYPSNLASPLQILIDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGDRREWLKPIMFSAGIGQIDHHHISKGEPEIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESHELLQSICQREKVSMAVIGTISGDGRVVLVDSLATQKCLSNGLPPPSPAVDLELDKVLGDMPKKSFKFNRVVYERERLDVAPEITVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPIADVAVTAQTFTGLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGPAMYDAAISLSEAMIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVVSVYVTCPDITKTVTPDLKLEDDGVLLHIDLSKGKRRLGGSALAQAFDQVGNECPDLDDVPYLKKVFEAIQDLLTDELISAGHDISDGGLLVCALEMAFAGNRGFILDLPSRGNSLFQTLYAEELGLVVEVSQKKLPVVVDKLKSVGVFAEIIGQVTASPSIEVKVDGLTWLQEKTSILRDMWEETSFQLEKFQRLASCVDMEREGLKHRYEPSWKLSFTPFFTDEKYLSTTLKPKVAVIREEGSNGDREMAAAFHAAGFEPWDVTMSDLLNGVISLQEFRGIVFVGGFSYADVLDSAKGWAACIRFNEPVLKQFQDFYKRPDTFSLGVCNGCQLMALLGWVPGPQVGGVLGAGGDLSQPRFIHNESGRFECRFTSVTINESPAMMFKGMEGSTLGVWAAHGEGRAYFPDEGVLDRIVHSDLAPVRYCDDGGDPTEIYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKHWDVDKKGPSPWLRMFQNARDWCS* 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0279 1410 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 270 319 IPR041609 -
Dod04g0279 1410 CDD GATase1_FGAR_AT 1143 1406 - -
Dod04g0279 1410 SUPERFAMILY Class I glutamine amidotransferase-like 1138 1409 IPR029062 -
Dod04g0279 1410 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 58 1409 - -
Dod04g0279 1410 Pfam AIR synthase related protein, C-terminal domain 532 686 IPR010918 -
Dod04g0279 1410 Pfam AIR synthase related protein, C-terminal domain 942 1072 IPR010918 -
Dod04g0279 1410 SUPERFAMILY FGAM synthase PurL, linker domain 253 320 - -
Dod04g0279 1410 Gene3D - 726 913 IPR036921 -
Dod04g0279 1410 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 253 314 - -
Dod04g0279 1410 SMART GATase_5_2 1140 1409 - -
Dod04g0279 1410 Gene3D - 1086 1410 IPR029062 -
Dod04g0279 1410 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 89 1410 IPR010073 GO:0004642|GO:0006189
Dod04g0279 1410 Gene3D - 914 1085 IPR036676 -
Dod04g0279 1410 SUPERFAMILY PurM C-terminal domain-like 928 1122 IPR036676 -
Dod04g0279 1410 SUPERFAMILY PurS-like 90 248 IPR036604 -
Dod04g0279 1410 PANTHER - 58 1409 - -
Dod04g0279 1410 SUPERFAMILY PurM N-terminal domain-like 741 921 IPR036921 -
Dod04g0279 1410 CDD PurL_repeat2 789 1062 - -
Dod04g0279 1410 Gene3D - 341 497 IPR036921 -
Dod04g0279 1410 SUPERFAMILY PurM N-terminal domain-like 321 528 IPR036921 -
Dod04g0279 1410 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1142 1386 - -
Dod04g0279 1410 SUPERFAMILY PurM C-terminal domain-like 530 764 IPR036676 -
Dod04g0279 1410 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 93 1408 IPR010073 GO:0004642|GO:0006189
Dod04g0279 1410 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 126 244 IPR040707 -
Dod04g0279 1410 CDD PurL_repeat1 305 688 - -
Dod04g0279 1410 Gene3D - 498 696 IPR036676 -
Dod04g0279 1410 Pfam CobB/CobQ-like glutamine amidotransferase domain 1140 1409 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0279 K01952 - gmx:100794589 2514.95