Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0277 ATGGCTGCCTCCGTCTCCACTGTCGGAGCCGTCAACAGAACTCCATTGAGCTTCAATGCATCCGGAGCTGGAGCTTCGGTTCCTAGCTCAGCCTTCATGGGCAGCAGCTTGAAGAAGATTACCTCAAGGGTCCCCATCAGCACCAAGGTTTCCTCTGGAAGCTTCAAAATTGTTGCACAGGAGATTGACGAGGATCAGCAGACCGACAAAGACAGGTGGAAGGGTCTGGCCTACGATATCTCTGATGACCAGCAAGACATCACAAGGGGGAAGGGTATGGTTGATACCCTTTTCCAGGCTCCAATGGATGCAGGAACTCACTATGCTGTCATGAACTCTTATGAGTACCTTAGCCAGGGACTTCGCCAGTATAGCTTGGACAACACTTTGGACGGCTTTTACATTGCCCCTGCCTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAAGGTCAAGGAAAATCCTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGCTGGAAAGTGGAAACGCAGGAGAGCCTGCAAAGCTGATCAGGCAGAGGTACCGTGAGGCCGCAGACATGATAAAGAAGGGAAAGATGTGCTGCCTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGTCTTGGTGGAACCACCCAATACACAGTCAACAACCAGATGGTCAACGCCACCCTCATGAACATTGCTGACAACCCCACAAATGTGCAGCTCCCTGGTATGTACAACAAGGAAGAGAACCCCCGTGTCCCCATCATTGTCACCGGTAACGATTTCTCAACGTTGTATGCTCCCCTCATCCGTGATGGGCGTATGGAGAAGTTCTACTGGGCTCCCACAAGGGACGATCGCATTGGTGTCTGCAAGGGAATTTTCCGCAGTGACAATGTCCCAGATGAGGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGGGCAGTGAGGGCCAGAGTGTATGATGATGAAGTAAGGAAGTGGGTTTCCGGTGTTGGTGTTGAAGTAGTTGGAAAGAAGCTTGTGAACTCAAAGGAAGGGCCTCCAACCTTTGAGCAGCCAAAGATGACTTTGGAGAAGCTCTTGGAGTATGGTAACATGCTTGTCCAAGAGCAAGAGAACGTGAAGAGAGTCCAATTGGCAGACAAGTACTTGAATGAGGCTGCTCTTGGTGAAGCTAACGAAGACGCTATCAAGAGTGGAACTTTCTACTGA 1317 0.4981 MAASVSTVGAVNRTPLSFNASGAGASVPSSAFMGSSLKKITSRVPISTKVSSGSFKIVAQEIDEDQQTDKDRWKGLAYDISDDQQDITRGKGMVDTLFQAPMDAGTHYAVMNSYEYLSQGLRQYSLDNTLDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRSDNVPDEDIVKLVDTFPGQSIDFFGAVRARVYDDEVRKWVSGVGVEVVGKKLVNSKEGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLNEAALGEANEDAIKSGTFY* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0277 438 PANTHER - 1 438 IPR044960 -
Dod04g0277 438 Gene3D - 125 309 IPR027417 -
Dod04g0277 438 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Dod04g0277 438 Gene3D - 310 422 - -
Dod04g0277 438 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 438 - -
Dod04g0277 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 355 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0277 Dod-Chr4 3416655 3420411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0277 - - vvi:100263871 772.696