Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0274 ATGTCCACCTCCTCACATCACTTCATTCTCTTCTCCATTCTCGTCTCCATCTCCCTCGCGGATGGGACACAAGTCATAATGGCAAACAACTGCAAAGAGAGTGTGTGGCCAGGGATTCTTGGCAATGCAGGGCACCCTTCTCTCAAGAATGGCGGGTTTCACCTTGGAAGTGGCGAAGAGGTTGTTCTCCAAGTCCCTGAGGGTTGGTCAGGGAGAATCTGGGGCAGACAAGGGTGTTCCTTCGATGAAAGAACCGGTAGAGGCTCTTGTCAAACAGGAGATTGTGCAGGCCTTTTGCAATGCAAGGGCATTGGTGGAGCCCCTCCTGCTACACTTCTGGAAATGACCCTTGGAACCCCACAATCACCAATGCATTTCTATGATGTGAGTTTGGTTGATGGGTTTAATTTACCAGTTTCAATGAAGCCAGTGGGTGGGGGCAGTGGTGGTGGTGGTGGTGTGGGTTGTGGTGTTGCAGCATGTGAGGCTGACTTGAATGCTTGCTGCCCATCAGCACTTGTTGTGCAGCGGGAAGCGAAGGTTGTGGGGTGCAAGAGTGCTTGTTTGGCTGCAAAATCTGATAGGTATTGCTGCACAGGGGAGTTTGCTGACCCAAAAAAGTGCACCCCTACTGTGTTTGCCCGTCTTTTCAAGACCGCTTGCCCTAAGGCTTATAGTTATGCTTATGATGAGTCAGCAGGGCTTAAGATTTGTAAAGCACCTCGGTATGTCATTACATTTTGCCCTCGACACTGA 756 0.504 MSTSSHHFILFSILVSISLADGTQVIMANNCKESVWPGILGNAGHPSLKNGGFHLGSGEEVVLQVPEGWSGRIWGRQGCSFDERTGRGSCQTGDCAGLLQCKGIGGAPPATLLEMTLGTPQSPMHFYDVSLVDGFNLPVSMKPVGGGSGGGGGVGCGVAACEADLNACCPSALVVQREAKVVGCKSACLAAKSDRYCCTGEFADPKKCTPTVFARLFKTACPKAYSYAYDESAGLKICKAPRYVITFCPRH* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0274 251 ProSitePatterns Thaumatin family signature. 86 101 IPR017949 -
Dod04g0274 251 SMART tha2 25 249 IPR001938 -
Dod04g0274 251 SUPERFAMILY Osmotin, thaumatin-like protein 24 250 IPR037176 -
Dod04g0274 251 Gene3D Thaumatin 24 249 IPR037176 -
Dod04g0274 251 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Dod04g0274 251 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Dod04g0274 251 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Dod04g0274 251 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Dod04g0274 251 PANTHER OS03G0233200 PROTEIN 3 250 IPR001938 -
Dod04g0274 251 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 3 250 - -
Dod04g0274 251 Pfam Thaumatin family 29 249 IPR001938 -
Dod04g0274 251 ProSiteProfiles Thaumatin family profile. 29 251 IPR001938 -
Dod04g0274 251 PIRSF PR5 1 251 IPR001938 -
Dod04g0274 251 CDD TLP-PA 24 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0274 Dod-Chr4 3383887 3385324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0274 10 250 Receptor kinase-like Gene Family AT5G38280 41.767 5.31e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0274 - - gsj:114381056 407.527