Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0265 ATGCTTCATTCAAGTTCAATTCAATCCAATCCAGCTATATATAAGAATATTATAAGTACGCAACAACACTTCACCACCACACAGTCAGGGCCCCATAGGACAATCCAACAACATAGTAGCCAGATCCCCCCCCACCATTTCTTCCAATTCCCATTGAAATTTGAAAGCTCCAACTCAAAAGCAAACCAAACCAAATCAAACCAACCAAACCCTTCAATCATCAACATGTCCACCACTTCCCTCCTTCTTCTTCTTCTTCTTCATCCTTCTCTTACAATCACCCTTTTCATAATTTTCCTTCAAATCCAAACAAGTGCTTCATATTCACAACCCCTCCTTCTATTGTCCTTACAAACCCAAACACTACAACACCCCACTGCCTCACTTCAAGGGCCACGTAAGCTCCCTTTCAAACACAACGTGACATTAACCGTTTCACTAACCGTAGGCACGCCCCCACAGAGCGTTACCATGGTCCTCGACACAGGGAGCGAACTCTCATGGCTCCACTGCAAAAAATACCCAAACCTAAACTCCACCTTCAACCCGAAACTCTCTTCCTCGTACACCCCAACACCATGCACATCGCCCGTTTGCAAGACCCGGACCCGAGACTTCCCCATACCCGTTTCCTGCGACACGAACAAACTCTGCCACGTCACCGTCTCCTACGTCGACGGAACCTACATGGAGGGCAACCTGGCAGCCGACACGTTCTTCACGGGCGGGTCGGGTCAACCCGGGATAGTCTTTGGCTGCATGGATTCGTCCTCGTTTAGCTCCAATGCTGACGAGGACTCAAAGACGACCGGGTTAATGGGCATGAACCGCGGGTCGCTCTCGTTTGTGACCCAATTGGGCCTCCCGAAATTCTCGTACTGCATCTCCGGCGACTCCTCAGCCGGCGTTCTGCTCTTCGGCGACGCAACGCTACCTTGGCTCGGGCCGTTAAAATACACGCCGCTGGTCAAAATGTCAACCCCGTTGCCGTACTTTGACCGGGTCGCATACACGGTCCGACTCGAGGGGATTCGGGTCGGGTCGAAACGACTGAATCTACCGGACTCGGTTTTTGTCCCGGACCACACCGGGGCGGGTCAGACTATGGTGGACTCGGGCACCCAGTTCACGTTCCTTCTCGGGTCGGTTTACACTGCGTTGAGAGACGAGTTTGATGCGCAGACGAAAGGGGTGCTGACCCGGTTGGACGACCCGAATTTCGCGTTCCAGGGGGTGATGGACCTGTGTTACCTGGTTCCTTCGGTTCGGGTCGGGTTTTCGGGTGTTCCGGCTGTGACGCTGTTGTTTGAGGGTGCGGAGATGAGTGTGTCCGGGGAGAGGCTGTTGTATCGGGTGGGTGAGGTGGCTGCTGCAAAGGGCAGTGATTGGGTGCACTGTTTCACGTTTGGGAACTCTGATATGTTGGGGATTGAGGCTTATGTGATTGGGCACCATCACCAGCAGAACGTGTGGATGGAGTTCGATTTGGTCAACTCTAGGGTTGGATTTGCTGACACCAGGTGCGAACTTGCCAGTCAACGCCTAGGGATGGGTCCTTAG 1560 0.5288 MLHSSSIQSNPAIYKNIISTQQHFTTTQSGPHRTIQQHSSQIPPHHFFQFPLKFESSNSKANQTKSNQPNPSIINMSTTSLLLLLLLHPSLTITLFIIFLQIQTSASYSQPLLLLSLQTQTLQHPTASLQGPRKLPFKHNVTLTVSLTVGTPPQSVTMVLDTGSELSWLHCKKYPNLNSTFNPKLSSSYTPTPCTSPVCKTRTRDFPIPVSCDTNKLCHVTVSYVDGTYMEGNLAADTFFTGGSGQPGIVFGCMDSSSFSSNADEDSKTTGLMGMNRGSLSFVTQLGLPKFSYCISGDSSAGVLLFGDATLPWLGPLKYTPLVKMSTPLPYFDRVAYTVRLEGIRVGSKRLNLPDSVFVPDHTGAGQTMVDSGTQFTFLLGSVYTALRDEFDAQTKGVLTRLDDPNFAFQGVMDLCYLVPSVRVGFSGVPAVTLLFEGAEMSVSGERLLYRVGEVAAAKGSDWVHCFTFGNSDMLGIEAYVIGHHHQQNVWMEFDLVNSRVGFADTRCELASQRLGMGP* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0265 519 CDD pepsin_A_like_plant 142 508 IPR034161 -
Dod04g0265 519 Gene3D Acid Proteases 315 513 IPR021109 -
Dod04g0265 519 SUPERFAMILY Acid proteases 144 508 IPR021109 -
Dod04g0265 519 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 158 169 IPR001969 GO:0004190|GO:0006508
Dod04g0265 519 PANTHER ASPARTYL PROTEASE-RELATED 92 517 IPR001461 GO:0004190|GO:0006508
Dod04g0265 519 ProSiteProfiles Peptidase family A1 domain profile. 143 504 IPR033121 -
Dod04g0265 519 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 92 517 - -
Dod04g0265 519 Gene3D Acid Proteases 128 308 IPR021109 -
Dod04g0265 519 Pfam Xylanase inhibitor N-terminal 145 308 IPR032861 -
Dod04g0265 519 Pfam Xylanase inhibitor C-terminal 336 504 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0265 Dod-Chr4 3304682 3306414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0265 144 509 Miscellaneous Gene Families AT1G44130 23.529 8.84e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0265 - - gmx:100783835 635.95