Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0253 ATGTTGTTGCAGTCTCTGCTCATCAGCTCTTCACGCTTCAGATTTTCCCCGAAAACTCACATTTGCCGGTTGAGAAAAAACTCGAGGAATTCACGCATGGCGCCTCCAATCCTTTCCCTGGTTCTTCCTTCCGAGACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTCCAGGGGTATGTTGGTAATAAATCAGCTGTCTTCCCTCTGCAACTGTTGGGCTATGATGTGGATCCAGTTAATTCTGTGCAGTTTTCGAATCATACAGGATACCCCACTTTTAAGGGCCAGGTTTTGAATGGACAGCAACTCTGGGATCTGATAGAAGGCCTTGAAGGAAATGATTTATTGTACTACACTCATTTATTAACAGGTTATATTGGTTCAGTCTCCTTTCTAAACACTGTATTAGATGTTGTCAGCAAGCTTCGCTCAAGAAACCCTGAACTTATATATGTTTGTGATCCGGTGATGGGTGATGAAGGAAAACTTTACGTTCCTCAAGAGCTGATTTCTGTCTATCGTGAGAGGGTTGTTCCAGTAGCTTCAATGTTAACCCCCAACCAGTTTGAAGCAGAACTACTGACAGGATTCAGGATTCAGTCTGAAGGAGATGGCCAGGAAGCTTGTAAGTTTCTTCATGCAGCTGGACCATCAAAGGTTGTAATTACAAGTATAAACATAGACGGCAATCTTCTCCTCATTGGCAGCCATGAAAAGGAAAAGGGACAGCCTCCCAAACAATTTAAGATTGTGATTCCGAAAATACCAGCTTATTTTACGGGAACGGGAGATCTTATGACTGCACTTCTCCTTGGTTGGAGCAATAAATACCCGGACAACCTTGAGATAGCTGCAGAACTTGCAGTATCAAGCTTGCAGGCACTTCTGCAAAGGACACTCAATGACTACAAAAGTGCAGGTCATGATCCCCAATCAACCAGTCTAGAGATCAGATTAATTCAAAGCCAGGATGATATTCGCAGCCCTCAAGTCAAATTTAAAGCTGAAATATACGGCTGA 1023 0.435 MLLQSLLISSSRFRFSPKTHICRLRKNSRNSRMAPPILSLVLPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPVNSVQFSNHTGYPTFKGQVLNGQQLWDLIEGLEGNDLLYYTHLLTGYIGSVSFLNTVLDVVSKLRSRNPELIYVCDPVMGDEGKLYVPQELISVYRERVVPVASMLTPNQFEAELLTGFRIQSEGDGQEACKFLHAAGPSKVVITSINIDGNLLLIGSHEKEKGQPPKQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYPDNLEIAAELAVSSLQALLQRTLNDYKSAGHDPQSTSLEIRLIQSQDDIRSPQVKFKAEIYG* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0253 340 Pfam Phosphomethylpyrimidine kinase 127 230 IPR013749 -
Dod04g0253 340 PANTHER PYRIDOXAL KINASE 38 337 - -
Dod04g0253 340 TIGRFAM pyridox_kin: pyridoxal kinase 48 337 IPR004625 GO:0008478|GO:0009443
Dod04g0253 340 PANTHER PYRIDOXAL KINASE 38 337 IPR004625 GO:0008478|GO:0009443
Dod04g0253 340 CDD pyridoxal_pyridoxamine_kinase 48 301 IPR004625 GO:0008478|GO:0009443
Dod04g0253 340 Gene3D - 44 339 IPR029056 -
Dod04g0253 340 SUPERFAMILY Ribokinase-like 47 337 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0253 Dod-Chr4 3109813 3117645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0253 K00868 - gmx:732558 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0253 04 3109813 3117645 Dod04g0253 04 3109813 3117645 ECH