Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0237 ATGGATCACCTGCTGCATTACGTGGACGGTACTGGCATCAACTTCCCTCAAATCCAGCTCAGGCAAGACCTGGCTGCGGCTTCTTCATCTTCCTCTCAACCACCAAGCCCAAACCCTGCTTTGTATCTCCTTCCTGCTAACCCGACCACCACCCTTCACCACCATGCCTCATCCCCCTCCTCCTCTGCTCCCCTTGCTGCTGCTGCTCCCCCTACTGCTGCTGCTGCTGCTGCTGATCCCCCTACTGATGCTGCTGCTCCTCCCCCTGCTCATCCACGTTTGCCAGAACACTTGATGCATAAAAATCGTTTACAAGAATTTGCTCAAAGGTCAAATATAGCTCTTCCCATGTATCAAACTATTAATGAGGGATCTCCACATGCTCCAAGGTTTAGGTCAACGGTGTGGGTGGATGGAATGAGTTATACTTCCCAAGTCACTTTCTCTCAACGAAAAGCTGCTGAGCAAGATGTTGCCAGACTTGCTTTTGAAAACCTATCTAATAGAATTAGAGAAGAATGCCCTCTTGTTTCTGAGAATACTTGGTATTTTTCCAAGTCCATCTTGAACGAATATGCTACTAAGCTGAATCTGGAAAGACCCACTTACGACACTGTTCAACTAGAAGGGTCGATTCCTTTTTTTCAATCTTCTGCGGTTTTCAATGGTACAAAATACACTGGTGATGCTGCTAGAAACAAAAAAGAGGCCGAGCAGTTGGCAGCTCGTTCTGCTATTCTTTCAATTCTAGCAGGTGGTTCTAACCCAGGAACACTCTATGAGATAATAAAGTCAAAAACTAAAATTTATGCTGCAGTCAAATCAAACAAATCCCAATGCACTGATGCTAATGCTGTAGCAGCCATAGCAAATACAGGGCATGCCTCTAGTTCACTGGATCATAAAGATAAGGAAGTTGCAAGTCTTGTGGCTGCTAATAATGATGTAGCAAAAATTGAACTTCCTGTGTCTTCTAAAATGCTTACCTCATGCCAAGAATTTCAGATGCCTGAATCTGTACCATCTGCTGAAGCCACCAAGCTTACAAATATTCCTCTCCAACCAGGAGGTTCAGCCCAGCCAGGAGGTTCAGCCCAGCCAGGAGGTTCAGCCCAACCGGTAGGTTCAGTCCAACCAGTAGTTTCAGTGCAACCAGTGGGTTCGGTGCAACCAGTAGGTTCAGTCCAACCAGTAGGTTCGGTCCAACCAGTAGGTTCAGTCCAACCAGGAGTTTCAGGTCCAACCGGGAGTTTCGGTCCAACCGGGAGTTTCAGTCCAACTGGGAGGTTCAGAACAGAGTCAACAGGCTATAGGGTACCGCTTGCAGCAATTCCTTGTTCATTGGCACAGTGA 1353 0.4693 MDHLLHYVDGTGINFPQIQLRQDLAAASSSSSQPPSPNPALYLLPANPTTTLHHHASSPSSSAPLAAAAPPTAAAAAADPPTDAAAPPPAHPRLPEHLMHKNRLQEFAQRSNIALPMYQTINEGSPHAPRFRSTVWVDGMSYTSQVTFSQRKAAEQDVARLAFENLSNRIREECPLVSENTWYFSKSILNEYATKLNLERPTYDTVQLEGSIPFFQSSAVFNGTKYTGDAARNKKEAEQLAARSAILSILAGGSNPGTLYEIIKSKTKIYAAVKSNKSQCTDANAVAAIANTGHASSSLDHKDKEVASLVAANNDVAKIELPVSSKMLTSCQEFQMPESVPSAEATKLTNIPLQPGGSAQPGGSAQPGGSAQPVGSVQPVVSVQPVGSVQPVGSVQPVGSVQPVGSVQPGVSGPTGSFGPTGSFSPTGRFRTESTGYRVPLAAIPCSLAQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0237 450 MobiDBLite consensus disorder prediction 50 65 - -
Dod04g0237 450 MobiDBLite consensus disorder prediction 394 432 - -
Dod04g0237 450 Gene3D - 89 173 - -
Dod04g0237 450 Gene3D - 176 252 - -
Dod04g0237 450 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 62 355 - -
Dod04g0237 450 PANTHER RIBONUCLEASE III 62 355 IPR011907 GO:0003723|GO:0004525|GO:0006364
Dod04g0237 450 SMART DRBM_3 185 250 IPR014720 -
Dod04g0237 450 SMART DRBM_3 100 167 IPR014720 -
Dod04g0237 450 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 184 251 IPR014720 -
Dod04g0237 450 MobiDBLite consensus disorder prediction 349 376 - -
Dod04g0237 450 SUPERFAMILY dsRNA-binding domain-like 185 253 - -
Dod04g0237 450 MobiDBLite consensus disorder prediction 25 95 - -
Dod04g0237 450 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 99 168 IPR014720 -
Dod04g0237 450 SUPERFAMILY dsRNA-binding domain-like 100 166 - -
Dod04g0237 450 Pfam Double-stranded RNA binding motif 101 166 IPR014720 -
Dod04g0237 450 Pfam Double-stranded RNA binding motif 185 246 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0237 Dod-Chr4 2932223 2937068 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0237 - - aip:107631266 298.516