LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0216	ATGGATGAGAACACCGCAGAGCAACAAGAGAAGCAGCGATTGGCGCAGAGAATAGCCTCGATTCTCGACGAGGCTCGAGCCTCTTTCGCGACGCACAACCGCAAGCTCAAGGACCTCTCCCTCCTCCGATCCAAGTCCCCATCCCTCTCGCTCTTCTTCTCCGCCTTCTCCACAGCCCTATCCCCTCTCTTCCACTTCCACAGGCGCCTCCCCTCCGCCGAACGCGCCGTCGCATTCGCCTCCGCCTTCGCCGCCTCCCACGACCCCGCCGCCGGCTCCGACGAGTTCCTTGACCTCTTCCTCAGGTTCCTCATTGCCGCCTCCGCCTCCGCCAACAAGACTGCTAGGTTCCGTGCCTGCCAGATCGTCTCCGAGATAATATTGAGGCTACCGGATGATGCAGAAGTGAGCGAAGACGTGTGGGATGAGGTGATAGAGTGCCTGAAGTTGAGGGTAGGGGACAAGATCCCTATGGTGCGTACATTTGCCGTGAGGGCGCTTTCTCGCTTTGCGAACGACACTGTGAACAGTGACATCCTCGATTTGTTTCTTGAGCAGCTTCCCTTGGAGCAGAATGCGGATGTTCGCAAGATGATTGTGCTATCTTTGCCTCCTTCTAGTGTAACCTCTCAAGTTATCATTGACTGTACCTTGGATGTCAGCGAATCTGTACGCAAAGCAGCATACTGCGTTCTAGCTAATAAATTTCCCCTTCACAGCTTGAGCATTAAGCTCAGGACGGTAATTCTTCGGAGAGGACTTGCTGATCGATCTGTTGCCATCTCAAAGGAATGTTTCAAACTGTTGAAAGATGAATGGCTTATAAAGTGTTGTAACAGTGATCCTCTAGAACTTCTCAAGTATCTTGATGTTGAAACTTACGAATCCGTTGGTGAGTCTGTCATGGAGGCGCTTCTAAAAGCTGATTTAGTAAAACTACAGAGCAGTGCAAGTATCCAGCAGTATATATCATCAAATGATGACATGGCAGATGGGGACTCAGTGCATTGCTTACCTAGCATTCAGCTGATAGAAGCTGAGGCTGCTCTTTATTGGAGAACTGTATGCAAGCATTTGCAGTCAGAAGCACATGCTAAAGGCTCTGATGCTGCAGCTACAATGGGCACTGAAGCAGAAGTATATGCAGCTGAAGCATCTGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCAACAGTTGATGATTACATAGAGTTGGTCAGAGCTCATATCGATGCTGGGTTAAACCATCGCTTTGCTTGCCGGCAGCTACTTTTACTTGGTACTATGTTCAATTTTTCAGATGTTACAAATAGAAAGGCTGCTAGTGCATTTCTGCGGGAGCTGATGTGCAAGCCTCCTGAGCATGAGGTTGATAATGAAGGGAATGTGGTTGTCATTGGAGATGGATTAAGTTTTGGTGGAGACAATGACTGGGCAGAAGCAGTAGCCGGATTAGCAATGAAAGTCCATGCTGCTCCCGGTGAATTTGAAGAAGTAGTTCTTGCAGTTATAGAAGGGCTAGCTCAACCTTGCAGGGAGAGAACAGCAGATTATGTGCAGTGGATACACAGCCTTTCTCTTACTGGCCTTTTGCTGAAAAATGCAAGGTCAATGCGCTTGCTTCAGGGCAAGGCTATTGAACCAGAGGAACTACTCCAATCTTTACTGCTCCCTGGGGCCAAACATGCTCACTTGGAGGTGCAAAGGATTGCAGTCAGATGCCTTGGCCTTTTTGGGCTTTTGGAGAGGAAACCAAGTGCGGAACTTTTGAAACAACTGAGAATTTCATACATCAAAGGGCCGCATTCAATTAGTATTGAGGCTTGTAAAGCGTTGATTGATCTTGGGATGTGGCATGGTCCTCAAGAAGTTGACAGGGTGTTAAAGCACGATATACCGTGCCAGATCAACTGCGAAAAGAAGAGTTTTAGTCCCGTAAACTTTTCTGATTTAGAAGGGGATTTAGATGTTGAAACGCTTGATTTCCTATATGGTGGCTTTGAAAACGACGACTGGTCTGATCCTCTAACTAGCAATGAAGATGAGTGTGTTCATGCTGTTCTTGGAGAGGGTTTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGCATACCCGCTTCTTTGCATCCTTTGATTTTATCCAAGCTCATTTACTTGTACTTCAGCGACGTGTCCGAACACCTGCAGAGGTTGAAGCAATGCTTATCTGTATTTTTTGAGCACTACCCATGTCTCTCTGCCAATCATAAGAGTTGCATATCAAAGGCTTTCATTCCCGTAATGCGTTCAATGTGGCCTGGAATTTTTGGCAATTCCGGAGGTTCTCCTTTTATGGTGTCGCAGATGCGTAAGCGTGCTGTTCAAGCCTCACGTTTTATGCTGCAGATGCTGCAGGTTCCTTTATACGTTAAAGAGACTCAACCAGAGACTGACAATGCTAGTACAGAAAGTCCCCAAGTCATAGACAGTTGTGCAGAAGTTCCATTTGAGTGCGGTGAGGAGGGGCTTGCACTGCGTATAGCCATTGAGGCGGCAAGCTTTCCCTCGAAGAAGACAGCTGCTGAGAAGTCATATGTGTCGGCATTATGTAGAATACTTGTCTTGCTTCATTTTCGGTTATCAGAACAAGGGCCAATAAAATTCATGAGGAGACTTTTAAGTCGCATGGTTGAATGTGTATCTGCAGAGAAGGATCTTCTAAAAGAATTGAAGCGCATGGCTGAACGTATCATGACTGCAGATAGGCAGCCAGATCAGGAATTGTTGCAAGATGAAGTTAATCTCATTTTGGGGAAATTGGAAACTGACTTCAACCTGGATCTGGATGGTTCTGCTGGAATGCCACAAACACCAGCTGCACAACCAACTAAACCTACACGTTCTAGGAGAAGGGTAAGGATTGAGGATAATCGTTCTGAGGATAGTACTGATGAAGCTTCACCTGCTTCTGTGGTGCCTAGCACCAATCATACCTTACGAAGCCGCTCACAGAGAGCAAGCAAAACTGCAGCACTGAGTAAGATGTCTGCCAGATCACTGAAAATTGATGAAATCGAAGAGCAGGAGGAAGAAGACTCCGATGTGACATCTGATGATTCTGATGAATCTGATTAG	3120	0.4663	MDENTAEQQEKQRLAQRIASILDEARASFATHNRKLKDLSLLRSKSPSLSLFFSAFSTALSPLFHFHRRLPSAERAVAFASAFAASHDPAAGSDEFLDLFLRFLIAASASANKTARFRACQIVSEIILRLPDDAEVSEDVWDEVIECLKLRVGDKIPMVRTFAVRALSRFANDTVNSDILDLFLEQLPLEQNADVRKMIVLSLPPSSVTSQVIIDCTLDVSESVRKAAYCVLANKFPLHSLSIKLRTVILRRGLADRSVAISKECFKLLKDEWLIKCCNSDPLELLKYLDVETYESVGESVMEALLKADLVKLQSSASIQQYISSNDDMADGDSVHCLPSIQLIEAEAALYWRTVCKHLQSEAHAKGSDAAATMGTEAEVYAAEASDKNDLLEKILPATVDDYIELVRAHIDAGLNHRFACRQLLLLGTMFNFSDVTNRKAASAFLRELMCKPPEHEVDNEGNVVVIGDGLSFGGDNDWAEAVAGLAMKVHAAPGEFEEVVLAVIEGLAQPCRERTADYVQWIHSLSLTGLLLKNARSMRLLQGKAIEPEELLQSLLLPGAKHAHLEVQRIAVRCLGLFGLLERKPSAELLKQLRISYIKGPHSISIEACKALIDLGMWHGPQEVDRVLKHDIPCQINCEKKSFSPVNFSDLEGDLDVETLDFLYGGFENDDWSDPLTSNEDECVHAVLGEGFAKILLLSDNYPSIPASLHPLILSKLIYLYFSDVSEHLQRLKQCLSVFFEHYPCLSANHKSCISKAFIPVMRSMWPGIFGNSGGSPFMVSQMRKRAVQASRFMLQMLQVPLYVKETQPETDNASTESPQVIDSCAEVPFECGEEGLALRIAIEAASFPSKKTAAEKSYVSALCRILVLLHFRLSEQGPIKFMRRLLSRMVECVSAEKDLLKELKRMAERIMTADRQPDQELLQDEVNLILGKLETDFNLDLDGSAGMPQTPAAQPTKPTRSRRRVRIEDNRSEDSTDEASPASVVPSTNHTLRSRSQRASKTAALSKMSARSLKIDEIEEQEEEDSDVTSDDSDESD*	1040

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0216	1039	MobiDBLite	consensus disorder prediction	1020	1039	-	-
	Dod04g0216	1039	PANTHER	CONDENSIN COMPLEX SUBUNIT 3-RELATED	9	1029	IPR027165	GO:0000796\|GO:0007076
	Dod04g0216	1039	Gene3D	-	72	252	IPR011989	-
	Dod04g0216	1039	MobiDBLite	consensus disorder prediction	963	978	-	-
	Dod04g0216	1039	Coils	Coil	898	918	-	-
	Dod04g0216	1039	Pfam	Nuclear condensing complex subunits, C-term domain	525	873	IPR025977	-
	Dod04g0216	1039	Coils	Coil	4	24	-	-
	Dod04g0216	1039	PANTHER	CONDENSIN COMPLEX SUBUNIT 3	9	1029	-	-
	Dod04g0216	1039	SUPERFAMILY	ARM repeat	75	760	IPR016024	-
	Dod04g0216	1039	MobiDBLite	consensus disorder prediction	942	1039	-	-
	Dod04g0216	1039	MobiDBLite	consensus disorder prediction	979	1009	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0216	K06678		-	gmx:100817677	1582

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod04g0216	04	2647903	2656008	Dod04g0216	04	2647903	2656008	ECH