Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0214 ATGTCTCTGCGTGCGGCAGCATCTAATTTTCTCAAAAAACTTCGCCTTCCTGCTTCCCATGCGTTTTCTGCATCTGGGGTATCCTCAAATGCGTTGCCCCTCTCACTTTCTGGCAAACTTAAACCTTTCCACTGGTATCAAACTGGATCATATGGTCGGAGGATGAATCTTAAGGATCCCTGTCTATGGATCGTTATATCTGGGCATGTTGCCATGATTCTAGGGATTAGTGCCAACACTGTATATGCAGAAGATGCAACAACTGAAGCATCTTCAGATAATGACCATGGCAATGACTTAATTGGATTAAGAAAAGTTGAGGATGGCTCTGTAGTATCAAATATACATACAGCAAAATGGAGAGTATTTACAGATAAAGCGAGGGATTTTTTCCTACAGGGAAAACTGGATGAGGCTGAAAAGCTCTTTCTTTCTGCTGTAGAAGAAGCCAAAGAAGGTTTTGGCCAGAGAGATCCACATGTTGCATCTGCATGCAATAATCTGGCAGAGTTGTACAGGGTCAAAAAGGCATTTGACAAGGCAGAACCATTGTACTTGGAAGCTATTGATATATTAGAGGAAGCTTTTGGTCCGGACGATATACGGGTTGGGACTGCTGCTCACAACCTTGCCCAGTTCTACCTTGGGCAGCGGAAGTTGGAAAAAGCTCACCTTAGCTATGAGCGTGCTTTGAAGATAAAACGGCGTGTTCTGGGATATGGTCATCCAGAATGTGCAGATACAATGTATCATCTAGGAGTGGTGCTGCATCTTCAAGGAAAAGAAAGGGATGCTGAGGCTCTCATTCAGGACTCGATAGGGATATTAGAGGAAGGTGGTGAAGGGGAGTCATATGTATGCATTAGAAGTCTCCGATACCTTTCACAGATATATTTGAAGTCACATCGACTTGCTGAAGCTGAGATGGTTCAGAGAAAGATCCTGCATATATTGGAATTGTCAAAGGGTTGGAATTCCTTGGACACAGTTATTGCAGCTGAATCTTTAGCTCTGACCCTGCAAGCATCTTGCAATACCAAAGATTCAAAAGAACTTTTTGAAAGATGTCTTAATGCCCGGAAAGCCTTACTTCCTGGTGATCATATTCAGATTGGTGCAAACCTACTTCATCTAGCACGGGTGGCAATGCTTGATAGCAGTCAACATAAAAAATGGGATGTTCCGAGAGCTAAAGCTGAGCTTGATGTGGCAAAGGATCACTTGCATAATTCCATCAGGATTGCACGACAATGTTTAGATAAAGTATTGAAACAAAAAGAGAAGTTGAAGAAATTTAGTGCACCTAGAGATTCTAGAAAGGAATCTCAAGCAGCACTGCTCATATTGCTGCAATCACTCAGTACTTTGTCATCGGTGGAGTTAGCCAAGCAAGAATTGCGCGAGACCAAGGAAGGGAATATTGACCTTGAAGCTAAGGAAGCACTTCTTCAATGCATTTCTGCTTACAAGGAGTTTGTCTATGAGAAGTCGGTCCCTGACGCCCCTCACATAAAGAACGAGTACCTTTCATGTTTAAAGCATGCTCAGAATTTGCTTGGTAATAAACTTGATGAAGAGCCAAGAAGTTAA 1590 0.4252 MSLRAAASNFLKKLRLPASHAFSASGVSSNALPLSLSGKLKPFHWYQTGSYGRRMNLKDPCLWIVISGHVAMILGISANTVYAEDATTEASSDNDHGNDLIGLRKVEDGSVVSNIHTAKWRVFTDKARDFFLQGKLDEAEKLFLSAVEEAKEGFGQRDPHVASACNNLAELYRVKKAFDKAEPLYLEAIDILEEAFGPDDIRVGTAAHNLAQFYLGQRKLEKAHLSYERALKIKRRVLGYGHPECADTMYHLGVVLHLQGKERDAEALIQDSIGILEEGGEGESYVCIRSLRYLSQIYLKSHRLAEAEMVQRKILHILELSKGWNSLDTVIAAESLALTLQASCNTKDSKELFERCLNARKALLPGDHIQIGANLLHLARVAMLDSSQHKKWDVPRAKAELDVAKDHLHNSIRIARQCLDKVLKQKEKLKKFSAPRDSRKESQAALLILLQSLSTLSSVELAKQELRETKEGNIDLEAKEALLQCISAYKEFVYEKSVPDAPHIKNEYLSCLKHAQNLLGNKLDEEPRS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0214 529 Coils Coil 459 479 - -
Dod04g0214 529 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 521 - -
Dod04g0214 529 Gene3D Tetratricopeptide repeat domain 121 282 IPR011990 GO:0005515
Dod04g0214 529 Pfam Tetratricopeptide repeat 163 235 - -
Dod04g0214 529 SMART tpr_5 204 237 IPR019734 GO:0005515
Dod04g0214 529 SMART tpr_5 246 279 IPR019734 GO:0005515
Dod04g0214 529 SMART tpr_5 120 153 IPR019734 GO:0005515
Dod04g0214 529 SMART tpr_5 162 195 IPR019734 GO:0005515
Dod04g0214 529 Gene3D Tetratricopeptide repeat domain 283 421 IPR011990 GO:0005515
Dod04g0214 529 SUPERFAMILY TPR-like 120 265 IPR011990 GO:0005515
Dod04g0214 529 SUPERFAMILY TPR-like 242 360 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0214 - - ccaj:109796654 825.854