Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0163 ATGGAGCTAGCAAACCCACGCTCCAAACGCAAGTTCGACGACGTCGTTTCACCACCACCGCCATCCAACGGCACCACCACCGCCGCCACCAACAACAACAACACCGTTGATCTCTCTCTCCTCGAAGCCATCGAGAAATCGCAGAACGCGGTGGAAGCCCTCGACCTCAGAACCCTAAAGAAGCTCGTCCTCTCCTTCGAACGCCGCCTCAAGGAGAACATCGAGGCTCGCCTCAAGTACCCTAACCAGCCCGAACGCTTCGCCGATTCCGAATTAGAGCTCCACGAGGAGCTCCACAAGCTCAAGCTCCTCGCCGGAGCACCCGAACTCTACCCTGACCTCGTCGCACTCAACGTCGTCCCCTCCATCGTCGACCTCCTCAACCACGACAACACCGACATCGCCATCGACGTCGTTCAATTGCTCCAGGACCTTACCGACGAGGACGTCCTCGACGACAACGACGAGCCTGCTAGGGTTTTGGTTGATGCGTTGATAGAGAACAGCGCGCTCGAGCTCCTCGTCCAGAACCTTCACCGGCTCTCCGATTCCGATCCCGACGAGTCCGCTGCGGTTTACGCCACGCTCGCCACGGTGGAGAATCTCATCGAGGTGAAGCCTGCCGTGGCGGAATTGGTTTGCGAGAAGACGAAGCTGATGAAGTGGCTGCTTGGGAAAATCAAGGTGAGGGAATTCGATGGTAATAAGCAGTATGCTTCGGAGATTCTGGCGATTTTGTTGCAGAGCAGCACAGCGAACCAGAAGAGGCTGGGGCAGATGAATGGCGTGGACGTGGTGCTGCAGGCAGTGGCAATGTACAAGAGCAGGGACCCTAAGAGCTCCGATGAGGAGGAGATGTTGGAGAATCTGTTTGATTGCTTGTGCTGCCTGTTGATGCCGTTGGAGAACAAGGAGCGGTTTGTTAAGGCTGAAGGGGTGGAGTTGATGATCATCATCATGAAGCAGAAGAAGCTTGCTTATGGGTCAGCTATAAGGGCGCTGGATTTCGCTATGACCAAGTACCCTCCTGCTTGTGAACGGTTTGTGGATGTCTTGGGGTTGAAGACGGCGTTTGCAGCTTTTATGGGTAAGATTCCTATTAATAAGAAGAACAAGAAAGAACGGTACCAAGAGGAACTAGAGGAGCGCCTTGTGTCGCTGATTGCTTCATTATTTGGTGGAATCTTGAGGGGTTCTAGGAGAGACAGATTATTAAGTAAATTTGTTGAGAATGAGTGTGAAAAGATAGACAGGCTAATGGAACTATACATGAGATACACAAATAGAGTCAAAGCAGAAACTGAACGATTGCATCAAATAGAGCTTGATGACTTGGAGATGGATGAAGATGAGAAATACAATCGTAAACTAGAATCTGGGCTTTACACTCTTCAGTTGATTGCTGTCATTCTGGGTCATGTTTGGTGCTCAGAGCACCCACAAATGAGAGGAAGAATTGAATTACTTCTCAAGCAAAACAAACTTAGTAAGAAGCATATCAAGGATATACTTCAGGAATATCATGACAATATTGGTGATCTTGATGGACCAGAAGAGAAGGAACGAGCACAAACGAAAATTCAAAAGTTCATAACGGCATTAGAATAA 1608 0.4975 MELANPRSKRKFDDVVSPPPPSNGTTTAATNNNNTVDLSLLEAIEKSQNAVEALDLRTLKKLVLSFERRLKENIEARLKYPNQPERFADSELELHEELHKLKLLAGAPELYPDLVALNVVPSIVDLLNHDNTDIAIDVVQLLQDLTDEDVLDDNDEPARVLVDALIENSALELLVQNLHRLSDSDPDESAAVYATLATVENLIEVKPAVAELVCEKTKLMKWLLGKIKVREFDGNKQYASEILAILLQSSTANQKRLGQMNGVDVVLQAVAMYKSRDPKSSDEEEMLENLFDCLCCLLMPLENKERFVKAEGVELMIIIMKQKKLAYGSAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPINKKNKKERYQEELEERLVSLIASLFGGILRGSRRDRLLSKFVENECEKIDRLMELYMRYTNRVKAETERLHQIELDDLEMDEDEKYNRKLESGLYTLQLIAVILGHVWCSEHPQMRGRIELLLKQNKLSKKHIKDILQEYHDNIGDLDGPEEKERAQTKIQKFITALE* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0163 535 PANTHER BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN 22 533 IPR039678 -
Dod04g0163 535 MobiDBLite consensus disorder prediction 1 32 - -
Dod04g0163 535 Coils Coil 416 436 - -
Dod04g0163 535 SUPERFAMILY ARM repeat 101 425 IPR016024 -
Dod04g0163 535 Gene3D - 52 534 IPR011989 -
Dod04g0163 535 Pfam Catenin-beta-like, Arm-motif containing nuclear 41 505 IPR013180 -
Dod04g0163 535 SMART DUF1716_2 33 139 IPR013180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0163 Dod-Chr4 1970097 1975049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0163 K12864 - gmx:100788964 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0163 04 1970097 1975049 Dod04g0163 04 1970097 1975049 ECH