Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0087 ATGTTCTTCTTCTTCTCCATGAGCCCCAAGAGACTTGCATTCTCTGAGCTTTTTGTGTCACATAGGAGAAAAGTGTCTTCTGGATTCAGTTTAAGCGTTGGAGTCTCTCTGCTTGTTCTCTGCGTGTTCTTTCTCCGCAACTCCCTCATTAGTGTTCCTCCAAAAGTTGAAGTCTTTTCCGGATTTGACACTGTTGGTCCAAATTCTTCGTTTAATACTAATACTAATCACTCTTCTTCTTCTTCTTATGGGAATAACAACGTTTCTGATAGTTCAGGAAGTGTTGTTGTTAGTAGAATTGGTGAAGTGAATGTGCCAGGGATTGGACAAGATGGTAACCTGAAGGCTATGGCGCAGGAAGGTATGCGTTTGGAGAACAACACCCTTTCGGAGAAATTTACTCAGAATGGTAATAATAATGCAAGCTTGCGTGATGGAGGAGGAGAACAAGGTTATGCACATAAATCAGATGAAAAGAATGGTGCATTGGTCACTAATGATAAAGGGAGTTTATTTGATGATCCTAATTGGCAAGGAATAGTTCCAAGGAAAAGTACTGTTGTTGAAAATTCTTCTATGATAGCCAAAGATGTGGACTTGCATGAAGAAGGGGAAAGGGTTGCTACAAATACAAGTGTTTCTGGTGATAGGAAAAATACGGGGTCAATGAGTAATTCTAGTTTTGGTCCTAATGTGGGGTCAGAGAACAACAATGTGAGCAATTCTTCAAATAAAGGAAACCATGGTGGGGATTTGATCGAGAAGAACAATGTAACAGTCATTGATAGTGATTCTCAAGAGGAGAAGAAAATGCAGGTTGGTTTGCTTGAGAAATGTGACATCTTTGATGGAAAGTGGTTAAGAGATGATTCAAAGCCATATTATCCTTTAGGGTCTTGTCCCCTCATCGATAGGGATTTTGATTGTCACCTTAGTGGGAGGCCTGATAGTGAATATGTGAAATGGAAGTGGCAGCCAAATGGGTGCGACATTCCAAGTTTGAATGCAACTGATTTTCTGGAGAGGTTGCGAGGACAGAGGCTGGTTTTCGTGGGGGATTCACTCAACAGGAACATGTGGGAGTCCCTGCTATGTATCCTCCGTCAAAGCATCAGGAACAAGAAGCGTGTCTTTGAAATCTCAGGGAAAAGGGAATTCAAGAAGAAAGGTGTCTATGCTTTTAGATTTGAGGCAAGTTTAGATTATAATTGTTCAGTGGATTTTGTTGTCTCACCATTCATTGTTCAAGAGTCAACTTTCAAAGGCAAAAATGGGTCATTTGAGACATTAAGATTGGATTTGATGGACCAGACGACTTCCAGGTATAAGGATGCTGATATCATAGTCTTCAATACAGGCCATTGGTGGACCCATGAGAAAACGTCAAAAGGGGAAGATTACTATCAAGAAGGAAACCATGTATACCCAAGACTCAAGGTTCTGGATGCATATATGAGGGCTTTGACCACTTGGGCTAGATGGGTGAACCGAAACATTGATCCCAATCAAACTCAGGTTTTCTTCAGAGGATACTCAGTTACCCATTTCTGGGGTGGGCAATGGAATTCAGGGGGACAGTGCCACAAAGAAACTGAGCCAATATTCAATGAAACTTACTTACAAAAGTATCCCTCAAAAATGTGGGCTCTAGAGAATGTCATCCAAAACATGAAGACCCCAGTGGTTTATATGAACATTAGTAGGCTTACTGATTATAGAAAAGATGGCCATCCTTCCATATATAGAAAGGAGTACAAGACATCAGCTGATCAGAACTCTAACGCCACGCTATTTGAAGACTGTAGCCATTGGTGCTTGCCTGGAGTGCCAGATACTTGGAATGAATTGCTATATGTTTCTCTCTTGAAATATGGAAAGGGAAGTTGGAAAAGCTGA 1896 0.4103 MFFFFSMSPKRLAFSELFVSHRRKVSSGFSLSVGVSLLVLCVFFLRNSLISVPPKVEVFSGFDTVGPNSSFNTNTNHSSSSSYGNNNVSDSSGSVVVSRIGEVNVPGIGQDGNLKAMAQEGMRLENNTLSEKFTQNGNNNASLRDGGGEQGYAHKSDEKNGALVTNDKGSLFDDPNWQGIVPRKSTVVENSSMIAKDVDLHEEGERVATNTSVSGDRKNTGSMSNSSFGPNVGSENNNVSNSSNKGNHGGDLIEKNNVTVIDSDSQEEKKMQVGLLEKCDIFDGKWLRDDSKPYYPLGSCPLIDRDFDCHLSGRPDSEYVKWKWQPNGCDIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLLCILRQSIRNKKRVFEISGKREFKKKGVYAFRFEASLDYNCSVDFVVSPFIVQESTFKGKNGSFETLRLDLMDQTTSRYKDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLDAYMRALTTWARWVNRNIDPNQTQVFFRGYSVTHFWGGQWNSGGQCHKETEPIFNETYLQKYPSKMWALENVIQNMKTPVVYMNISRLTDYRKDGHPSIYRKEYKTSADQNSNATLFEDCSHWCLPGVPDTWNELLYVSLLKYGKGSWKS* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0087 631 Pfam PMR5 N terminal Domain 277 330 IPR025846 -
Dod04g0087 631 MobiDBLite consensus disorder prediction 207 250 - -
Dod04g0087 631 MobiDBLite consensus disorder prediction 203 253 - -
Dod04g0087 631 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 628 IPR029962 GO:0016413
Dod04g0087 631 MobiDBLite consensus disorder prediction 132 167 - -
Dod04g0087 631 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 18 628 IPR029967 -
Dod04g0087 631 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 331 618 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0087 Dod-Chr4 964381 969137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0087 - - ccaj:109816771 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0087 04 964381 969137 Dod04g0087 04 964381 969137 ECH