Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0084 ATGGCGCGCAAGAAGATTAGAGAATATGACTCCAAGAGATTGTTGAAGGAGCACTTTAAGAGGCTCTCTGACAAGGAGTTGCAGATCAAGTCTGCACAAGTTACAGAATCCACTGATTTCAATGCGCTAGTCGAGAAGGAACCCTGGCTTTCATCTTGTAGACTGGTTGTGAAACCTGATATGTTATTTGGAAAGCGAGGCAAAAGCGGTTTAGTTGCCTTAAATTTGGATTTGGCACAAGTTGCTTCTTTTGTGAATGAGCGTCTTGGCAATGAGGTTGAGATGAGTGGATGCAAAGGACCCATAACCACTTTCATTGTTGAACCTTTTGTCCCGCATAATGAAGAGTTTTACCTAAACATTGTCTCAGAGAGACTTGGGAACGGTGTAAGCTTTTCAGAATGTGGAGGAATTGAAATTGAAGAGAACTGGGGCAAGGTTAAGACTGTATTTATTCCAACAGGAGAGTCCCTTACATTAGAAACGATTGCCCCACTTGTTGCAACCCTTCCCTGGGAGATCAAGGGAGAGATCGAGCAATTCCTCAAGGTGATTTTCACTTTATTTCAAGACCTGGATTTCACTTTCTTAGAGATGAATCCTTTCACATTGGTCGACGGAAAGCCATATCCGTTGGATATGAGAGGCGAACTAGATGACACTGCTGCTTTCAAGAACTTCAAGAAATGGGGAAACATCGAATTTCCATTGCCATTTGGAAGAGTTATGAATCCCACAGAGGCTTTCGTCCATGAATTAGATGAAAAGACAAGTGCATCTTTGAAATTCACCGTGTTGAACCCAAATGGCAGAATTTGGACAATGGTAGCTGGGGGAGGTGCTAGTGTCATCTATGCTGATACGGTAGGAGATCTTGGTTATGCATCCGAGCTTGGAAATTATGCGGAATATAGTGGAGCACCCAAAGAAGATGAAGTCATTACATGTGCAACTGCAAATCCAGATGGCCAAAAGAGAGCCCTTTTGATAGGAGGTGGAATAGCTAACTTCACTGATGTTGCCGCGACATTTAGTGGCATAATTCGAGCACTGAAAGAGAAGGAGTCAAAGATAAAAGCGGCAAGGATGCACATTTTTGTGAGAAGAGGAGGTCCCAACTACCAGAAAGGTTTAGTGAAAATGCGGTTACTTGGAGAGGAAATTGGCATCCCTATTGAGGTTTATGGACCTGAAGCAACAATGACTGGTATATGCAAAGAGGCTATTCAGTGCATCACTACTGCTGCTTAA 1251 0.4301 MARKKIREYDSKRLLKEHFKRLSDKELQIKSAQVTESTDFNALVEKEPWLSSCRLVVKPDMLFGKRGKSGLVALNLDLAQVASFVNERLGNEVEMSGCKGPITTFIVEPFVPHNEEFYLNIVSERLGNGVSFSECGGIEIEENWGKVKTVFIPTGESLTLETIAPLVATLPWEIKGEIEQFLKVIFTLFQDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVMNPTEAFVHELDEKTSASLKFTVLNPNGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEDEVITCATANPDGQKRALLIGGGIANFTDVAATFSGIIRALKEKESKIKAARMHIFVRRGGPNYQKGLVKMRLLGEEIGIPIEVYGPEATMTGICKEAIQCITTAA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0084 416 Gene3D - 240 415 IPR016102 -
Dod04g0084 416 SUPERFAMILY Succinyl-CoA synthetase domains 257 397 IPR016102 -
Dod04g0084 416 Gene3D - 1 233 - -
Dod04g0084 416 Pfam ATP citrate lyase citrate-binding 241 410 IPR032263 -
Dod04g0084 416 PANTHER ATP-CITRATE SYNTHASE 1 416 - -
Dod04g0084 416 Pfam ATP-grasp domain 6 203 IPR013650 -
Dod04g0084 416 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 1-RELATED 1 416 - -
Dod04g0084 416 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0084 Dod-Chr4 914356 918432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0084 1 416 Acyl Lipid Metabolism Gene Families AT1G10670 85.106 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0084 K01648 - gmx:100787121 739.569