Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0083 ATGGAAGAATTGGAGCAGTGGAAGGAACAACTCCTTCACTGGTGGCGCCTCGCCGAGGAGCACCTCCACCAGGTTCCCCCAATCCAGCTCTACGCTGCCGCCGCCGTCCTCGTTTTTACCACCGTGCTCCTCCTATCATTGCGGTTGTTGAAGCGCGCTAAGTCCAACACCATTGTATTGACTGGCCTCAGTGGCGCTGGCAAAACTGTTCTCTTCTATCAGCTTAGGGATGGATCTATCCATCAGGGGACTGTTACATCAATGGAACCTAATGAGGGAACCTTTGTTCTTCATTCTGAAACAACAGAGAAGCGCAAGATAAAACCTGTTCATATTGTTGATGTTCCTGGACATTCTCGTCTTCGATCCAAACTGGATGAATACTTGCCTAAAGCAGCTGGCATAGTTTTTGTGGTTGATGCTTTGGACTTCTTACCAAACTGCCGTGCTGCTTCAGAGTATCTATATGATATTTTGACAAAGGGAAGTGTTGTGAAGAAGAAGATTCCATTGCTTATTCTCTGCAACAAAACAGACAAAGTCACTGCTCATACCAAGGAGTTTATCCGCAGACAGATGGAGAAGGAAATGTATGGATTCAACACTCAATCTTTTATCTGCTCTCATTTGGTTCACCAATTACTTTGTAAGTGCATATTATTGTCAGCAGTTGGTGGATTATGTGAGTGTGAGCTGAATAGTTAA 705 0.4482 MEELEQWKEQLLHWWRLAEEHLHQVPPIQLYAAAAVLVFTTVLLLSLRLLKRAKSNTIVLTGLSGAGKTVLFYQLRDGSIHQGTVTSMEPNEGTFVLHSETTEKRKIKPVHIVDVPGHSRLRSKLDEYLPKAAGIVFVVDALDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKVTAHTKEFIRRQMEKEMYGFNTQSFICSHLVHQLLCKCILLSAVGGLCECELNS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0083 234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 196 IPR027417 -
Dod04g0083 234 ProSiteProfiles small GTPase Arf family profile. 49 234 - -
Dod04g0083 234 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 197 IPR019009 -
Dod04g0083 234 CDD SR_beta 56 197 IPR019009 -
Dod04g0083 234 Gene3D - 50 205 IPR027417 -
Dod04g0083 234 Pfam Signal recognition particle receptor beta subunit 54 198 IPR019009 -
Dod04g0083 234 PANTHER TRANSFERRIN 2 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0083 Dod-Chr4 906334 910103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0083 1 197 Miscellaneous Gene Families AT5G05670 72.727 1.98e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0083 K12272 - gmx:100800572 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0083 04 906334 910103 Dod04g0083 04 906334 910103 ECH