Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0080 ATGGTAATAGTAGCATTATCAGCATCACCATCTCCATCTCCATCTCCACTCCCACTCCCAGGGAGAAACCTCTTCTCCTCTCTCCCCTCCACACCACCACCGCCCCACGACCCTTCCCTCTCCGCCGCCACCCCTCAACCGCCCATCCCCATCCCCAAATACCCCCCTCCTCGCAAATCCCAACAAATCCCCGCCCTCAAGCTCCACAACCGCTCCAACTACTACAAGCCCATCCCCCCCCGCCACCCCGACGGCGGCCCCATCGCCACCTCCTCCGACGGCGACCGCTCCGTCGTCATCGGGGATTCCGGCGTGTCGTACCTGCTCCCCGGCGCCCCCTTCGAGTTCCAGTACAGCTACTCGGAGACCCCAAAAGTGAAGCCCATCGCCATCAGGGAGCCCGCCTTCCTGCCCTTCGCCCCTCCCGCCATGCCCAGGCCATGGACGGGGAAGGCCCCCCTCAAGAGCAAGAAGAAGAAGGACAACAAGATCAAGCTGCTCCAGTCCTTAAACCCAGCTCTTCCTCCTCCGCCTACCGGGGTGAAGCTGGTGGAGATGGCGAGACCACTGAAGCCTGCGAGGTACACCATCGATCCCGGGAAGACGAGGGAGGAGATACTGGGGGATCCGCTCAAGAAGTGGGAGATAAGGAACCTTGTTAAGCCTATGATCTCCGATAATCGCCAGGTTAATCTTGGAAGGGATGGATTAACGCATAACATGTTGGAGTTGATACACTCGCATTGGAAGCGTAGCCCTGTTTGTAAAATTCGTTGTAAAGGTGTTCCCACTGTGGATATGGATAATGTTTGTCATCATATTGAGGATAAAACAGGGGGAAAAATAATTCTTCGGGTTGGCGGTGTTGTTTATCTTTTCCGTGGAAGAAATTACAACTACAGTACTCGACCACAGTATCCAGTGATGCTCTGGAAGCCTGCTGCACCTGTTTACCCAAAACTTATACAAGATGCTCCAGGAGGATTAACAAAATCTGAAGCTGATGAATTACGAATGAAAGGGAAAAGCCTTTTGCCAATATGTAAATTAGCTAAAAATGGAGTCTACATCTCCCTTGTAAAGGATGTCAGAGATGCTTTTGAAGGAAGTCCTTTGGTGAAGATTGACTGCAAGGGACTGGATCCTAGTGACTACAAGAAATTAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTGCTGTTGTCTTTTGATGATGAACAGATATTGATGTGGCGGAGCAATGACTGGAAACCAAGATACCCAAAACCTCCTCCACTTTTTAGTGCTGCGGAAGCTGGCATTACAGGGAATTTGGAAAATACAGGTGAGACCGATGATAATCAATCCAACATGGTGAAGACAAGCCCAAAAATGTTGTCTCTGTGGAAGCGTGCAGTCGAGTCAAGCAAAGCTTTGTTGCTGGATGAGTATAATCTTGGTCCTGATGCCCTCTTGGAGAAGGTAGAGGAATTTGAAGGTATTTCACAGGCCACGGAGCACTCCTATCCAGCATTCATTTCATCAAATGAAAATGGTCCTAAAGGTTCAGTTACAAGCTTTGAAGATGGCACAGGAGACAACTATTCTAGTGATGATGGCCTACCCACTGAAGATGAAGATGAAGATGATGATGATTATGATTATTACCATGATGATGAGTATCATGACGATGACTTGTATGTTGTGGACTCATCTGCCGAACCCGGATCATTACCTATTGATTCGATTGTCAACAAGCTGAAACCAAAACTAGAATAG 1758 0.4932 MVIVALSASPSPSPSPLPLPGRNLFSSLPSTPPPPHDPSLSAATPQPPIPIPKYPPPRKSQQIPALKLHNRSNYYKPIPPRHPDGGPIATSSDGDRSVVIGDSGVSYLLPGAPFEFQYSYSETPKVKPIAIREPAFLPFAPPAMPRPWTGKAPLKSKKKKDNKIKLLQSLNPALPPPPTGVKLVEMARPLKPARYTIDPGKTREEILGDPLKKWEIRNLVKPMISDNRQVNLGRDGLTHNMLELIHSHWKRSPVCKIRCKGVPTVDMDNVCHHIEDKTGGKIILRVGGVVYLFRGRNYNYSTRPQYPVMLWKPAAPVYPKLIQDAPGGLTKSEADELRMKGKSLLPICKLAKNGVYISLVKDVRDAFEGSPLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRSNDWKPRYPKPPPLFSAAEAGITGNLENTGETDDNQSNMVKTSPKMLSLWKRAVESSKALLLDEYNLGPDALLEKVEEFEGISQATEHSYPAFISSNENGPKGSVTSFEDGTGDNYSSDDGLPTEDEDEDDDDYDYYHDDEYHDDDLYVVDSSAEPGSLPIDSIVNKLKPKLE* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0080 585 MobiDBLite consensus disorder prediction 1 62 - -
Dod04g0080 585 MobiDBLite consensus disorder prediction 504 531 - -
Dod04g0080 585 SUPERFAMILY YhbY-like 210 303 IPR035920 -
Dod04g0080 585 Gene3D - 329 423 IPR035920 -
Dod04g0080 585 MobiDBLite consensus disorder prediction 532 552 - -
Dod04g0080 585 Gene3D - 210 306 IPR035920 -
Dod04g0080 585 ProSiteProfiles CRM domain profile. 209 305 IPR001890 GO:0003723
Dod04g0080 585 ProSiteProfiles CRM domain profile. 327 423 IPR001890 GO:0003723
Dod04g0080 585 MobiDBLite consensus disorder prediction 504 554 - -
Dod04g0080 585 Pfam CRS1 / YhbY (CRM) domain 212 294 IPR001890 GO:0003723
Dod04g0080 585 Pfam CRS1 / YhbY (CRM) domain 329 412 IPR001890 GO:0003723
Dod04g0080 585 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 18 581 - -
Dod04g0080 585 SMART CRS1_YhbY_2 329 412 IPR001890 GO:0003723
Dod04g0080 585 SMART CRS1_YhbY_2 211 294 IPR001890 GO:0003723
Dod04g0080 585 SUPERFAMILY YhbY-like 329 420 IPR035920 -
Dod04g0080 585 MobiDBLite consensus disorder prediction 27 59 - -
Dod04g0080 585 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 18 581 IPR044599 GO:0000373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0080 Dod-Chr4 868641 873980 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0080 - - gmx:100801953 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0080 04 868641 873980 Dod04g0080 04 868641 873980 ECH