Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0076 ATGTTGGGGGGAAACAATGGTAATCCCGTCCTTTCTGTTTTCTTGGATGAGACTCAATTTCAGTATCAAACTAATGCAGCAAATCAACTGCAGCTGTTTGGAACTATGCAAACTGGATGCAGTGTTGACCCTGTTAATTATTTTGGTAATGAGCATATCAGTTCCATGATTCGATCTAACAAACGAAGCAGAGAAGCGGAAGATATATCAAAGCAACAAAAGCTTCAAATTTCCTTAAATTACAATGTCTGTCAAGATGAAGCTGATCGATCAGCAAACATGCCAAATCCAAACCCTGTGTCAATAGGATTGGGGCTTTCTTATGATGATGATGAGCATAACTCCTCTATTACTTCTGCCAGTGGCAGCATGAATGGCGCACCTTCAATCATATTATCACTTGGTGACAATTTCAGAAGTGAGCTTGATAGGCAGCAAGAAGAGCTGGACCAGTATATCAAGCTTCAGAAGGATCAACTGGCAAAACAAGTCAGAGATATGAAACAGAAACACGTGGCTTCTGTCCTTTCTACCATTGAGAAAGATGTTGGTAAGAAGCTAAGGGAAAAAGACTTGGAGGTAGAGAACATGAATCAGAGAAATAAGGAGCTAGCAGAGAAAATAAAGCAGGTATCTATTGAAGTGCAAAACTGGCATTGCAGAGCCAAGTATAATGAACAAATTGTTAATTTATTAAGGAACAATCTCCAGCAAGCAATTTCACAAGGAGTTGAACAAGGGAAGGAAGGGTTTGGAGACAGTGAAGTTGATGATGCTGCCTCATATGTTGACACCACTAACTTCCTGAGCATTCTAGGTGCACGCATGAAATCTACTTTGAAGAACCACCAAGGCATGGAGAACCACCTGACTTGCAGAGCATGCAAGGGAAAGGAGGTTTCCATGTTGTTGATGCCTTGCAGACACCTGTGCTTGTGTGACGACTGCGATAGATTTATCAATGTTTGTCCTGTATGCCAATTGATAAAAGCTACCAGTGTCCAAGTGTATATGGGTTAA 1020 0.4098 MLGGNNGNPVLSVFLDETQFQYQTNAANQLQLFGTMQTGCSVDPVNYFGNEHISSMIRSNKRSREAEDISKQQKLQISLNYNVCQDEADRSANMPNPNPVSIGLGLSYDDDEHNSSITSASGSMNGAPSIILSLGDNFRSELDRQQEELDQYIKLQKDQLAKQVRDMKQKHVASVLSTIEKDVGKKLREKDLEVENMNQRNKELAEKIKQVSIEVQNWHCRAKYNEQIVNLLRNNLQQAISQGVEQGKEGFGDSEVDDAASYVDTTNFLSILGARMKSTLKNHQGMENHLTCRACKGKEVSMLLMPCRHLCLCDDCDRFINVCPVCQLIKATSVQVYMG* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0076 339 Coils Coil 187 214 - -
Dod04g0076 339 Pfam Zinc finger, C3HC4 type (RING finger) 290 327 - -
Dod04g0076 339 ProSiteProfiles Zinc finger RING-type profile. 292 327 IPR001841 -
Dod04g0076 339 PIRSF SBP1_RNase_bind 1 339 IPR017066 -
Dod04g0076 339 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 338 - -
Dod04g0076 339 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 338 IPR017066 -
Dod04g0076 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 339 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0076 Dod-Chr4 825783 828966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0076 285 327 Miscellaneous Gene Families AT4G39050 37.209 1.59e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0076 K19042 - cpap:110813081 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0076 04 825783 828966 Dod04g0076 04 825783 828966 ECH