Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0068 ATGGATCCCAGAGGGGTGGCTGTTTCAGCTGAATCAAATTCGGATCAGAACCATTCGGGTCATGTGTATCATCTGGCTTTGGATATTGGAGGATCTCTTGCCAAGCTAGTTTACTTCACAAAAAATGATGATCAATTAGTTGATGGTGAGGAGAGGATATCTCCTGAAGAGGCGCTGGGGAAATCCAATGGCAGTAGGAACTGTCCGGTTCTTAATGGGAGGCTCAATTTTAAGAAGTTTGAAACTAGCAAGATTAATGATTGTTTAGAGTTTATCAAGACCATGAAACTTCATGTCGGAGGTAGTCCGCAGCAAGAAAATCCTAGAAGTCTGATGATAGCTGTTAAGGCCACAGGTGGTGGCGCGTACAAATATGCAGACCTCTTCAAGGAAAAGCTTGGGATCAGTCTTGACAAGCAAGATGAAATGGATTGTCTTGTTGCAGGAGCAAATTTTCTTCTTCAGGTGGTTCACCAGGAAGCATTTACCTATATGGGTGATCAAAAGCAATTTGTGGAGATTGACCAAAATGATTTGTATCCCTATCTTCTTGTTAATATTGGGTCTGGCGTTGGCATGATCAAGGTGGAAGGAGATGGAAAGTTCGAGCGAGTTAGTGGAACAAGTATTGGTGGAGGCACTTTCTGGGGTTTAGGAAAGCTTTTAACTAAGTGCAAGAGTTTTGACGAGTTGCTGGAATTAAGTTACCGGGGGAACAACAGAGCGGTAGATATGCTTGTTGGAGATATTTATGGTGGAATGGACTATGCAAAGATAGGTCTTGCATCAACTGCAATAGCATCTAGTTTTGGAAGGGCAATTTCTGATAATAAGGAGCTTGAGGATTACAAGCCTGAAGATATTGCTCGATCTCTTTTAAGAATGATCTCAAATAACATTGGTCAGATCTCTTACTTGACTGCCCTTCGATATGGACTGAAGAGGATATTTTTTGGCGGGTTTTTTATTCGAAGGCATCCTTTTACAATGGACACATTATCTGTTGCAGTTAATTTCTGGTCTAAAGGAGAGGCAAAAGCAATGTTTTTGCGGCATGAAGGGTTTCTTGGAGCTGTTGGTGCCTTCATGAGTAGTGATAAGCATGGCCTCAAGGAGCTATTGGGGAATCAAGCGGTGCAACAAATTCCCAGAAAATTGTCCTTTGCTGTGGATAAAACACAAGGTCCACTTGATGGGGAATTAATAAGTGGAGACGAAAGTATAGAGTGTAGTGTCTATGCTGCTTAG 1248 0.4199 MDPRGVAVSAESNSDQNHSGHVYHLALDIGGSLAKLVYFTKNDDQLVDGEERISPEEALGKSNGSRNCPVLNGRLNFKKFETSKINDCLEFIKTMKLHVGGSPQQENPRSLMIAVKATGGGAYKYADLFKEKLGISLDKQDEMDCLVAGANFLLQVVHQEAFTYMGDQKQFVEIDQNDLYPYLLVNIGSGVGMIKVEGDGKFERVSGTSIGGGTFWGLGKLLTKCKSFDELLELSYRGNNRAVDMLVGDIYGGMDYAKIGLASTAIASSFGRAISDNKELEDYKPEDIARSLLRMISNNIGQISYLTALRYGLKRIFFGGFFIRRHPFTMDTLSVAVNFWSKGEAKAMFLRHEGFLGAVGAFMSSDKHGLKELLGNQAVQQIPRKLSFAVDKTQGPLDGELISGDESIECSVYAA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0068 415 SUPERFAMILY Actin-like ATPase domain 132 363 IPR043129 -
Dod04g0068 415 Gene3D - 242 354 - -
Dod04g0068 415 SUPERFAMILY Actin-like ATPase domain 23 160 IPR043129 -
Dod04g0068 415 Gene3D - 16 173 - -
Dod04g0068 415 TIGRFAM panK_eukar: pantothenate kinase 24 364 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dod04g0068 415 Pfam Fumble 24 363 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dod04g0068 415 PANTHER PANTOTHENATE KINASE 10 415 - -
Dod04g0068 415 PANTHER PANTOTHENATE KINASE 10 415 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0068 Dod-Chr4 767820 773434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0068 K09680 - gmx:100808162 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0068 04 767820 773434 Dod04g0068 04 767820 773434 ECH