Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0066 ATGGCAGATTCTGCTGATGTCACCACCCACGATGTTCTCTCCATCCTCTCTTCCTCCGACCGGGACTTCCTCGTCCGGAACAACGGTGATCAGATTAAAATTGATAGCTTGAAGGGGAAGAATATTGGTTTATACTTTTCAGCATCCTGGTGCGGTCCATGCCGAAGATTCACCCCATCTCTGGTGGAGGTGTACAATGAAGTCTCTCCTAAAGGTGACTTTGAGATAGTTTTCATCACGGCTGATGAAGATGATGAGGCTTTTAAGGGTTACTTTTCCAAGATGCCATGGCTTGCTATTCCATTCTCCGATTCGGAGACACGCAATCGCCTTGATGGATTGTTTCAAGTGAGGGGGATTCCCCATCTTGTATTACTTGATGAAACTGGAAAGGTTGTCACTGAAGATGGAGTTGAAGTTATCAATGAACATGGAGTTGAAGGGTACCCCTTTACATCAGCAAGGATCCAAGAGTTGAAGGATCAAGAAGAGGAAGCTAGGAGGAATCAATCATTGAGATCACTCTTGGTGTCTCCTTCCCGTGATTATGTGATATCTTCTGATGGGAAGAAAATACTTGTCTCTGAGCTTGAGGGCAAGACGGTTGGTCTTTATTTCTCACGGACATCATCCAAATCATGCCCTGAATTTGCGCGACAGCTTGCGGAGGTTTATGAGAAGCTGAAGACGAAGGGGGAGAACTTTGAGGTTGTGATGATACCCCTTGATGATGAAGAAGAATCCTTCAAGCAAGGATTTCAAAGTGTGCCTTGGTGGTCCTTGCCTTTCAAGGACAAGAGATGCGGGAAGTTGGCTCGTTACTTTGACCTCTCTACTCTCCCCACTCTGGTTATCATTGGACCAGATGGGCAAACTCTCCATTCTAATGTTGCTGAGGCTATTGAGGAGCATGGGATTGTTGCATACCCTTTCACTCCTGAAAAGTTTGCTGAGCTTAGTGAGATAGAAAAGGCCAAGGAGGCAGCTCAAACCCTTGAGTCAATTTTGGTGTCTGGAGATAAAGATTTTGTCATTGGGAAAGATGGGGTGAAGGTTCCAGTGTCGGACTTAGTGGGGAAAAACATTCTCCTCTACTTCTCAGCCCACTGGTGTCCTCCATGCCGTGCATTCCTTCCAAAACTTATTGAAGCATATCATAAGATTAAGGCAAAGGACAATGCATTTGAAGTCATTTTCATCTCAAGCGATCAGGATCAAGCCTCGTTTGATGATTTCTTTGGAGGAATGCCATGGTTGGCTCTCCCCTTTGGCGACTCAAGGAAGGCATCCCTGAGTCGCAAATTCAAGGTATCTGGAATCCCCATGCTTGTGGCCATTGGATCAAATGGCCGGACTGTCACAAGAGAAGCTCGCGATCTGGTTGGGATGCATGGGGCAGATGCTTATCCTTTCACTGAGGAGAGAATTAAAGAAATTGAAGCAGAATTTGAAGAGACTGCAAAGGGGTGGCCTGAGAAGGTGAAACATGAATCACATGAGCATGAGCTGGTGTTGACTCGGCGTAGGATTTACTACTGTGATGTTTGTGAAGATGAGGGGCATGTATGGTCATACTACTGTGACAACTGTGATTTTGATGTCCACCCAAAATGTGCATTGGAGGAGAAAGGAAGCAAAGATGATGCCAAGGAACAAGAGAAGTCCAAAGATGGATGGGTTTGTGATGGAGAAGTCTGCACGAAAGCCTGA 1710 0.4579 MADSADVTTHDVLSILSSSDRDFLVRNNGDQIKIDSLKGKNIGLYFSASWCGPCRRFTPSLVEVYNEVSPKGDFEIVFITADEDDEAFKGYFSKMPWLAIPFSDSETRNRLDGLFQVRGIPHLVLLDETGKVVTEDGVEVINEHGVEGYPFTSARIQELKDQEEEARRNQSLRSLLVSPSRDYVISSDGKKILVSELEGKTVGLYFSRTSSKSCPEFARQLAEVYEKLKTKGENFEVVMIPLDDEEESFKQGFQSVPWWSLPFKDKRCGKLARYFDLSTLPTLVIIGPDGQTLHSNVAEAIEEHGIVAYPFTPEKFAELSEIEKAKEAAQTLESILVSGDKDFVIGKDGVKVPVSDLVGKNILLYFSAHWCPPCRAFLPKLIEAYHKIKAKDNAFEVIFISSDQDQASFDDFFGGMPWLALPFGDSRKASLSRKFKVSGIPMLVAIGSNGRTVTREARDLVGMHGADAYPFTEERIKEIEAEFEETAKGWPEKVKHESHEHELVLTRRRIYYCDVCEDEGHVWSYYCDNCDFDVHPKCALEEKGSKDDAKEQEKSKDGWVCDGEVCTKA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0066 569 Pfam C1 domain 498 539 IPR004146 -
Dod04g0066 569 ProSiteProfiles Thioredoxin domain profile. 319 481 IPR013766 -
Dod04g0066 569 SUPERFAMILY Thioredoxin-like 345 455 IPR036249 -
Dod04g0066 569 ProSiteProfiles Thioredoxin domain profile. 13 161 IPR013766 -
Dod04g0066 569 SUPERFAMILY Thioredoxin-like 24 134 IPR036249 -
Dod04g0066 569 PANTHER THIOREDOXIN 4 540 - -
Dod04g0066 569 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 540 - -
Dod04g0066 569 SUPERFAMILY Cysteine-rich domain 489 540 IPR046349 -
Dod04g0066 569 CDD TryX_like_TryX_NRX 22 151 IPR045870 GO:0004791
Dod04g0066 569 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Dod04g0066 569 Gene3D Glutaredoxin 333 472 - -
Dod04g0066 569 Gene3D Glutaredoxin 16 153 - -
Dod04g0066 569 Gene3D Glutaredoxin 175 312 - -
Dod04g0066 569 Pfam Thioredoxin-like 40 132 IPR012336 -
Dod04g0066 569 Pfam Thioredoxin-like 199 291 IPR012336 -
Dod04g0066 569 Pfam Thioredoxin-like 360 451 IPR012336 -
Dod04g0066 569 CDD TryX_like_TryX_NRX 342 471 IPR045870 GO:0004791
Dod04g0066 569 SUPERFAMILY Thioredoxin-like 184 294 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0066 Dod-Chr4 755102 759197 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0066 K17609 - gmx:100809224 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0066 04 755102 759197 Dod04g0066 04 755102 759197 ECH