LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0058	ATGGCGAGAACATTTAAAAACTGCATGATGCTTTGTTGTACAAGCAAGATTGCCTCGAAGGAAGAGATGGCAGGAGAGTCATACAAGGATGCCATTGCAGCGCTCACCAACCTTCTCAGCCAGAAAGCCGACCTCGGGGGCGTCGCCGCCGCAAAGATCAAGCAGCTCACGGCGGAGCTGGAAGCCGCCGGTTCCAAGCCGTTTAACCCGGATGAGAGGATCCGAACCGGCTTTGACCACTTCAAGAAGGAGAAATTCCTGAAGAATCCGAATTTGTATGGCGAACTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTGTTTGCTTGCTCAGACTCAAGAGTTTGCCCATCCCATGTTCTGGACTTCCAACCTGGTGAAGCCTTTGTGGTCCGAAACATCGCCAACATGGTTCCACCATATGACAAGACGAAGTATTCTGGAACAGGGGCGGCCATTGAATATGCAGTCTTACATTTAAAGGTGAAGAATATTGTGGTGATTGGACACAGCTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACTTCAAGTGAATTCATAGAGCCATGGGTCCAAATTTGTACTCCAGCAAAGTCCAAGGTTAAAGCAGGAGCTAGCAACTCAGATTTCTCAGATCAGTGTGCCAGCTGCGAGAAGGAAGCTGTGAATGTATCGCTAGGGAACCTGTTGACTTATCCATTTGTAAGAGATGCAGCTGTGAATGAAAAGTTAGCTTTGAAGGGTGCACATTACGATTTTGTTAAAGGCAGCTTTGAGCTTTGGGATCTGGACTTCAAAATCTCGCCCTCTGTTTCCCTTTAA	837	0.4803	MARTFKNCMMLCCTSKIASKEEMAGESYKDAIAALTNLLSQKADLGGVAAAKIKQLTAELEAAGSKPFNPDERIRTGFDHFKKEKFLKNPNLYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYDKTKYSGTGAAIEYAVLHLKVKNIVVIGHSCCGGIKGLMSIPDDGTTSSEFIEPWVQICTPAKSKVKAGASNSDFSDQCASCEKEAVNVSLGNLLTYPFVRDAAVNEKLALKGAHYDFVKGSFELWDLDFKISPSVSL*	279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0058	278	CDD	beta_CA_cladeB	77	266	IPR045066	GO:0004089\|GO:0008270
	Dod04g0058	278	PANTHER	CARBONIC ANHYDRASE	23	278	-	-
	Dod04g0058	278	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	153	173	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Dod04g0058	278	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	109	116	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Dod04g0058	278	Pfam	Carbonic anhydrase	105	262	IPR001765	GO:0004089\|GO:0008270
	Dod04g0058	278	PANTHER	CARBONIC ANHYDRASE	23	278	IPR001765	GO:0004089\|GO:0008270
	Dod04g0058	278	Gene3D	Carbonic anhydrase	63	278	IPR036874	GO:0004089\|GO:0008270
	Dod04g0058	278	SMART	Pro_CA_2	97	267	IPR001765	GO:0004089\|GO:0008270
	Dod04g0058	278	SUPERFAMILY	beta-carbonic anhydrase, cab	72	273	IPR036874	GO:0004089\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0058	Dod-Chr4	703895	716521	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0058	K01673		-	gmx:100810496	487.648

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod04g0058	04	703895	716521	Dod04g0058	04	703895	716521	ECH