Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0057 ATGTCAGAATCAAAACCAGGATTGAGGAAGCCAGTGTTCACCAAGGTGGAGCAGCTTCGCCCTGGGACCAGTGGGCACACTCTGACTGTGAAGGTGGTCAGCACCAAGTTGGTGATGCAGAAGGGTCGTCCCGATGGTCCTCAACCTCGCCAAATGCGAATCGCTGAATGTTTGGTTGGTGACGAGACAGGAATGATCATTTTCACTGCCAGAAATGATCAAGTGGATCTTATGAAAGAGGGCTCTACTGTGACCCTGCGCAATGCCAAAATCGACATGTTCAAAGGATCAATGAGACTTGCTGTTGACAAGTGGGGCCGCGTTGAGGTCACAGAACCTGCTAGTTTCACTGTCAAGGAAGATAATAACTTGTCCCTTATTGAATACGAACTGGTGAATGTTGTGGAGTGA 411 0.4866 MSESKPGLRKPVFTKVEQLRPGTSGHTLTVKVVSTKLVMQKGRPDGPQPRQMRIAECLVGDETGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVE* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0057 136 PANTHER BNAA07G09820D PROTEIN 1 136 - -
Dod04g0057 136 Gene3D - 23 126 IPR012340 -
Dod04g0057 136 SUPERFAMILY Nucleic acid-binding proteins 6 134 IPR012340 -
Dod04g0057 136 CDD SoSSB_OBF 27 110 - -
Dod04g0057 136 PANTHER OS05G0244600 PROTEIN 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0057 Dod-Chr4 670268 676131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0057 - - csv:101212074 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0057 04 670268 676131 Dod04g0057 04 670268 676131 ECH