Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0056 ATGAGCACGCTCTTCCTCTTCATCCTCCTCTTCTTGTCATCATTCACCGTTGGTTACGGCGCCGCCGACACAAACCCGTTCACACCGAAGGCATTCGCGATGCGCTACTGGGACAAAGCGATACGCAACACACTCCCAAAGCCATCCTTCCTCATCTCCAAGGCCTCACCGTTAACCGCCATCGACGCCGCCAAGTTCGCCAAGCTCGCGGCAACCAACGCGCTCTCCACGCGCCTCCCGGAGTTCTGTTCCGCCGCCAACCTCCTCTGCTTCCCTGACACCATCAAGCCCAGCCTCGCCAAACACCCCAGAAGCAGCAACTTCGCCAACTACAACGACGGCGAGAACTTCACCAGCTACGGCAACAACGGCGCCGGGCCTTTCAGCTCCTTCACGAACTACTCCGAGGGCCTCTTCACCACTCCGGTCAACGACTTCCGCGGCTACAGCCGGTCATCGGCCGGCGGCAGCGAGAAGTTCGTCAGCTACGGCAACGACGGCAACGTCGTGGACGAGGGCTTCCACTCCTACGGCACCAGAACCGGCGGCGGATCCGGCGAGTTCATCAAGTACACCAACGGGGCCAACGTGCCGGACCTCCGGTTCACCACGTACTCCACCGGCGCCGCCGGAAGGCAGGAGAGGTTCTCGAAGTACAGCGACGACGGAAACGCCGGCGAGCAGAGCTTCTTGAACTACGGGAAGGACGCGGCGGCGGAGTTGAGCGATTTCAACAGCTACGGGAACAATTCAAACGTGGTGGCGTCGTTGTTTTCGAGCTACGGGGGGGATGGGACGTCGCCGAACGACACGTTCAGGAACTACGGCGTGAACATGAACAACCCGACGGAGACGTTCAGGACGTACGGAGCCGGAACCTTAGGGGGGATACAGAGCTTCAAGACTTATAGGGAGGAGGCCAACGTGGGTGCGGACTCGTTCGAGTCGTACGCAAAGGGGTCTGGGTCAGGAGCCGAGGTGGACTTCACCAACTATGGCAAGTCCTTCAATGAAGGGACCGACACCTTCAAAGGCTATGCCAAAAACGCAACTGATAATCCTAAGGTTGGGTTCAAGGAATACGGTGTGAACAACACTTTCAAGGATTACAACAAAGAAGCCGTCTCGTTCTCCACCTACACCAATGCTAGCTCGTCATCAACTTCCCATAAGGCTAGTGGCAGTCTGGTAAAAAAGTGGGTTGAGCCGGGCAAGTTCTTCCGTGAGAACATGCTGAAGGAAGGCACCATCATGCCCATGCCGGATATTAGGGACAAGATGCCCAAAAGGTCGTTTCTGCCTCGATCCATTTTGACCAAATTGCCCTTCACATCTTCCGACCTCAAGCGCGTGTTCAAGGCCTCCGATGAGTCCTCCACGGACAAGATGATAAAGGACTCATTGGGAGAGTGCGAAAGGGCACCCAGCAAGGGTGAGACAAAACGGTGCGTTGGCTCGGTCGAGGACATGATTGATTTTGCAACCTTGGTTTTGGGTCGCGACATTACGGTTCGTTCCACTGAGAATGTTAACGGGTCGAAGAACAACGTCATGGTGGGTCGAGTTAGAGGGATCAACGGTGGGAACGTAACAAAATCTGTTTCTTGCCATCAAAGCTTGTTCCCTTATTTGCTTTACTACTGCCACTCGGTTCCTAAGGTTCGAGTTTATGAAGCGGATCTTTTGGACCCAACCACTAAGGCTAAGATCAACCATGGTGTTGCCATCTGTCACTTGGATACAACTGCTTGGAGCCCTACCCACGGTGCATTTTTGGCTCTTGGGTCGAGTCCAGGTCAGATCGAAGTGTGCCACTGGATCTTTGAGAACGATATGACTTGGACTAGTTGCTAA 1854 0.5512 MSTLFLFILLFLSSFTVGYGAADTNPFTPKAFAMRYWDKAIRNTLPKPSFLISKASPLTAIDAAKFAKLAATNALSTRLPEFCSAANLLCFPDTIKPSLAKHPRSSNFANYNDGENFTSYGNNGAGPFSSFTNYSEGLFTTPVNDFRGYSRSSAGGSEKFVSYGNDGNVVDEGFHSYGTRTGGGSGEFIKYTNGANVPDLRFTTYSTGAAGRQERFSKYSDDGNAGEQSFLNYGKDAAAELSDFNSYGNNSNVVASLFSSYGGDGTSPNDTFRNYGVNMNNPTETFRTYGAGTLGGIQSFKTYREEANVGADSFESYAKGSGSGAEVDFTNYGKSFNEGTDTFKGYAKNATDNPKVGFKEYGVNNTFKDYNKEAVSFSTYTNASSSSTSHKASGSLVKKWVEPGKFFRENMLKEGTIMPMPDIRDKMPKRSFLPRSILTKLPFTSSDLKRVFKASDESSTDKMIKDSLGECERAPSKGETKRCVGSVEDMIDFATLVLGRDITVRSTENVNGSKNNVMVGRVRGINGGNVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPTTKAKINHGVAICHLDTTAWSPTHGAFLALGSSPGQIEVCHWIFENDMTWTSC* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0056 617 SMART BURP_2 404 617 IPR004873 -
Dod04g0056 617 Pfam BURP domain 406 615 IPR004873 -
Dod04g0056 617 ProSiteProfiles BURP domain profile. 406 617 IPR004873 -
Dod04g0056 617 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 4 616 - -
Dod04g0056 617 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 4 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0056 Dod-Chr4 645984 649138 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0056 - - gmx:100811362 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0056 04 645984 649138 Dod04g0056 04 645984 649138 ECH