Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0046 ATGTGTCCACTAAATATGGCACTTTGGCAACATAATAAGCTACTCTTCTCACCCCTCCTAATCATCCTTTGCTTAGCAGCTGTGGTTTCTTCACACAGCAGGCCTTACACAAGTCCAAGTGTCACTCCATTGACGGATTCTTTTCCTCGTGTCCCAGTTGATCGTGCTTTTTCTAACGCTTTTGGGGCCTCAAATGTCAAGCTTCTAAATAATGGGTCCATGGCCACTCTGGCTCTTGACAAAACCTCAGGTTCTGGCTTGGTCTCGCAAAGTAGTTACTACTACGGATTCTTCAGTGCTGCAATCAAATTACCTGCTGGTTTGTCATCTGGAGTTGTAGTTGCCTTCTATTTGTCTAATTCAGAAAAGTTCCCCCACAACCATGATGAGATAGATATTGAGCTGCTTGGCCATGATAAGAGAAACGACTGGGTTATTCAGACAAATGTCTATGCCAATGGAAGTGTCAGCACAGGAAGAGAAGAGAAATTCTATTTCTGGTTTGACCCAACACAGCAGTACCATTACTACAGCATCTTGTGGAACAGCTACCACACAGTATTCTTGGTGGACAATATTCCAGTGAGGGAATTCACACACAGCAGTGCATACCCTTCTGTCTATCCATCAAAGCCTATGTCAGTTTATGCCACAATATGGGATGGATCAGAATGGGCCACTCATGGAGGAAAATACCCAGTTAACTATAAGTATGCACCCTTTGTTGTTTCATTTGCAGAGATGGAACTTAGTGGCTGCATAGCTGATTCCACAGGAGCAGTTTCTTCATGTTCTAAAGCCAGCACTTCAGGAAAAGACCCTGTTAATGGACCAGAGTTTACCAAGCTATCACAGCAGCAGGTAGCAGCCATGGATTGGGCTAGAAGCAAACTCATGTTTTACTCCTACTGCAATGACAGAAGCAGGTTCAAAGTCATGCCACCAGAATGCAGCTAA 957 0.441 MCPLNMALWQHNKLLFSPLLIILCLAAVVSSHSRPYTSPSVTPLTDSFPRVPVDRAFSNAFGASNVKLLNNGSMATLALDKTSGSGLVSQSSYYYGFFSAAIKLPAGLSSGVVVAFYLSNSEKFPHNHDEIDIELLGHDKRNDWVIQTNVYANGSVSTGREEKFYFWFDPTQQYHYYSILWNSYHTVFLVDNIPVREFTHSSAYPSVYPSKPMSVYATIWDGSEWATHGGKYPVNYKYAPFVVSFAEMELSGCIADSTGAVSSCSKASTSGKDPVNGPEFTKLSQQQVAAMDWARSKLMFYSYCNDRSRFKVMPPECS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0046 318 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 6 317 - -
Dod04g0046 318 CDD GH16_XET 54 317 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod04g0046 318 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 281 317 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Dod04g0046 318 SUPERFAMILY Concanavalin A-like lectins/glucanases 57 317 IPR013320 -
Dod04g0046 318 Gene3D - 37 317 - -
Dod04g0046 318 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 6 317 IPR044791 GO:0004553
Dod04g0046 318 PIRSF EndGlu_transf 15 318 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod04g0046 318 Pfam Glycosyl hydrolases family 16 57 237 IPR000757 GO:0004553|GO:0005975
Dod04g0046 318 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 46 245 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0046 Dod-Chr4 569008 570959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0046 17 318 Glycoside Hydrolase AT1G10550 63.072 1.90e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0046 K08235 - gmx:100778993 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0046 04 569008 570959 Dod04g0046 04 569008 570959 ECH