Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3371 ATGGATGGTTCAAAAGCTAACTATTTGTTATTTGGAGCTTTCACTTGTCTTATGATGCTTATTTTGTGTCTTCATCAGGTTTCTAGGAGTTTTCATGAAAACTTTCTTCAGTTTACCTTGTGGTCTAGGTCAAATAGTACAAGTTCTTCTTTGGCAAAGGACAATTCCCCTATTGATGAAGGATTCAAGGGCCATGATATGCTTGCCCCTTTCACAGCGGGGTGGCAGACTACCGATTTGAATCCTTTAGTTATAGAAAAGTCTGAGGGAAGCTATGTATATGACCATAATGGGAAAAAATATCTTGACTCACTTGCTGGTCTATGGTGCACAGCTCTAGGGGGGAATGAACCACGTCTGGTCGAAGCTGCCACTGCACAATTGAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGGACGACAAAACCTTCTTTGGATCTAGCCAAGGACCTCCTAGAAACTTTCACAACCAGAAAAATGGCAAAAGCTTTTTTTGTTAACAGTGGATCAGAAGCGAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCACTTGGAAGACCAAATAAAAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACGTTGATAGCCGCTAGTCTTTCCGGCCTTCCAGCTTTGCATCAGAAATTTGATCTGCCCGCTCCTTTTGTCTTGCACACAGACTGTCCACATTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAGTTTTCAACCAGATTAGCCAACAATTTAGAGGAGCTGATTCTGAAAGAAGGACCAGAGACAATTGCTGCATTTATTGCTGAACCAGTGATGGGGGCAGGGGGTGTAATACCTCCACCAGCAACTTATTTTGAAAAGATCCAAGCCGTTGTCAAGAAGTATGACATTCTTTTTATTGCGGATGAGGTGATCTGTGCATTTGGAAGGCTTGGGACAATGTACGGATGTGACAAGTACAACATTAAGCCTGACCTTGTCTCCTTAGCTAAGGCACTGTCTTCTGCATATATGCCAATTGGAGCAGTTCTTGTGAGTCCAGAAGTTTCGGAAGTTATACACTCACAGAGCAACAAGCTTGGTTCTTTTTCCCATGGTTTTACCTACTCTGGACACCCTGTATCCTGTGCTGTTGCAATTGAAGCACTCAAGATTTACAAAGAAAGAAATATTGTCGAGCAGGTGAGAAACATCTCCCCAAGGTTCCAAGATGGCGTAAAAGCTTTTTCTGACAGTCCTATCATTGGAGAGATACGAGGAACTGGCTTAATTCTGGGTACTGAGTTCACAGACAATAAGTCACCTAATGATCCGTTTCCTCCTGAATGGGGGATAGGTACCTACTTTGGAGCACAATGTGAGAAGCATGGGATGTTAGTTCGCGTAGCTGGAGATAACATCATGATGTCTCCACCGTTCATTATTTCCCCGCAAGAAGTTGATGAGTTAATCAGCATTTATGGGAAAGCTCTGAAAGATACAGAAGAGAGGGTGCAAGAGCTCAAGTCTCAGCGGAAGTAG 1545 0.4272 MDGSKANYLLFGAFTCLMMLILCLHQVSRSFHENFLQFTLWSRSNSTSSSLAKDNSPIDEGFKGHDMLAPFTAGWQTTDLNPLVIEKSEGSYVYDHNGKKYLDSLAGLWCTALGGNEPRLVEAATAQLKKLPFYHSFWNRTTKPSLDLAKDLLETFTTRKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEELILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEVSEVIHSQSNKLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVRNISPRFQDGVKAFSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGIGTYFGAQCEKHGMLVRVAGDNIMMSPPFIISPQEVDELISIYGKALKDTEERVQELKSQRK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3371 514 Gene3D - 117 399 IPR015421 GO:0003824
Dod03g3371 514 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 36 509 - -
Dod03g3371 514 CDD OAT_like 77 499 IPR005814 GO:0008483|GO:0030170
Dod03g3371 514 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 307 344 IPR005814 GO:0008483|GO:0030170
Dod03g3371 514 SUPERFAMILY PLP-dependent transferases 68 500 IPR015424 -
Dod03g3371 514 Coils Coil 492 514 - -
Dod03g3371 514 Pfam Aminotransferase class-III 82 498 IPR005814 GO:0008483|GO:0030170
Dod03g3371 514 Gene3D Aspartate Aminotransferase, domain 1 83 499 IPR015422 GO:0003824
Dod03g3371 514 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 36 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3371 Dod-Chr3 66357004 66363931 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3371 K16871 - gmx:100815181 894.804