Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3361 ATGGGAGAAGCGGCACAAGATCAAAATAATTTCAGATCAGAAAGTGCTCTTCTGAGCTGCTCAGATGCCAATTCCAAACCCTCACTTTCCCCTTTGTGCATACACATTGATCAACCCAGCTCCCAAGTCTACCCTTCTCCTTCTGAATTTGATTCCTCTGCAATCTCTCATCAACAGCACCCCAAAGATGCGTGGCTTCCTATCACAGAGTCCAGAAATGGAAATGTGTTCTATGCAGCCTTCCATATTCTAAATTCCAACATTGGATTTCAAGCTCTCATGCTTCCGCTTGCATTTGCCACTCTTGGTTGGGCATGGGGTAGTGTATGTTTGTCCGTAGTGTTTGTTTGGCAGCTGTACACCATATTTCTCCTTGTGCGACTTCATGAATCTGTCCCAGGAATTCGTCACAGCAGATACCTCTTCCTCGCCATGGCAGCCTTCGGTAGAAGAGTAGGAAAGGTGGCAGGCGTTATTCCCGGTGATGTACCTTTCGGGGGGAACTTGCGTCATGCTTATCATCACAGGGGGTGGGAACCTGAAGCAACTATTCAGGACACTTTGTGA 567 0.4727 MGEAAQDQNNFRSESALLSCSDANSKPSLSPLCIHIDQPSSQVYPSPSEFDSSAISHQQHPKDAWLPITESRNGNVFYAAFHILNSNIGFQALMLPLAFATLGWAWGSVCLSVVFVWQLYTIFLLVRLHESVPGIRHSRYLFLAMAAFGRRVGKVAGVIPGDVPFGGNLRHAYHHRGWEPEATIQDTL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3361 188 Pfam Transmembrane amino acid transporter protein 73 157 IPR013057 -
Dod03g3361 188 PANTHER OS05G0424000 PROTEIN-RELATED 54 160 - -
Dod03g3361 188 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 54 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3361 Dod-Chr3 66221990 66227318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3361 39 160 Organic Solute Cotransporters AT4G35180 52.459 8.04e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3361 - - var:108339053 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3361 03 66221990 66227318 Dod03g3361 03 66221990 66227318 ECH