Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3356 ATGCTTGATGGATTTCAAGATACACAGTTTTGGTATGTTGATAGAGGGATAATCTTGGGTGATTCTAAGGATTGTGATGATGATGCATATTCCCCCGGAGAAAGGGGTAGGCCTTCGGTTAGGCAAGAGGAGAAGTGGTGGCTTCCTTCTCCTAAGGTTCCACCAAATGGCTTGTCTGAGGATGATAGGAAAAGGTTGCAGCAGTGCAGGGATTGCACCAACCAGATATTAAAGGCTGCCATGGCAATTAATAGTTCTGTTCTTGCTGAAATGGAAATTCCTGGCGCCTACATAGAATCTTTACCCAAGAACGGAAAAGCTTGCTTAGGGGATATTATCTATCGATACATAACTGCTGAACAGTTCTCGCCTGAATGTCTCCTCGATTGCCTGGATCTCTCTTCAGAGCACCACACTCTGGATGTAGCTAATAGGATTGAGGCTGCTGTTCATGTATGGAGGTTGAAGGACCATAAGAAACATATAAACTCAGTGAAATCCAGACGCTCTTGGGGTGGAAAGGTGAAGGGCCTAGTTGGCACTGATGGGGAAAAGAACCATTTTCTTGCCCAACGAGCAGAGACCCTTCTACAAAGCTTGAAACACAGATTTCCGGGGCTCCCTCAAACAGCACTAGATATGACCAAAATACAATATAATAAGGATGTAGGACAGTCTATTCTTGAGAGTTATTCAAGGGTGATGGAGAGCTTGGCCTTTAACATAATGGCAAGGATTGATGATGTCCTTTATGTAGATGATTCTATAAAGCGATGTGCAGCTGCAGAATCTATCTCTCTTTTCAATAGGGGAGGTTTTGGTGGTCTACCCATCCAGAAGAGAATGTCTCCAAGCCCCTTCTCAATTCAACACAGCCCATATGCCTCTCCATTTGCAACCCCAACGTTCTGCTCGTCCCCTCCTCTTACTGGGAGTCCTTGCAGTCCAAGAAGAACACATGCTGTGAAGAGGAATGGTCTAAAGGGCACGACAGATTCAAAGTCAGAAAAGTTTGCCTCAGCTGAATTTGAGAGGGTGTGGTCATATACAGGAAACCTCAGTTCAAGGAGAGTGTCTGGTGATGCTCCAGAAAGAGACTAA 1101 0.4496 MLDGFQDTQFWYVDRGIILGDSKDCDDDAYSPGERGRPSVRQEEKWWLPSPKVPPNGLSEDDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPGAYIESLPKNGKACLGDIIYRYITAEQFSPECLLDCLDLSSEHHTLDVANRIEAAVHVWRLKDHKKHINSVKSRRSWGGKVKGLVGTDGEKNHFLAQRAETLLQSLKHRFPGLPQTALDMTKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAAESISLFNRGGFGGLPIQKRMSPSPFSIQHSPYASPFATPTFCSSPPLTGSPCSPRRTHAVKRNGLKGTTDSKSEKFASAEFERVWSYTGNLSSRRVSGDAPERD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3356 366 MobiDBLite consensus disorder prediction 27 61 - -
Dod03g3356 366 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 1 257 IPR005512 GO:0005085
Dod03g3356 366 MobiDBLite consensus disorder prediction 309 335 - -
Dod03g3356 366 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 366 IPR038937 GO:0005085
Dod03g3356 366 Gene3D PRONE domain, subdomain 1 40 254 - -
Dod03g3356 366 Gene3D PRONE domain, subdomain 2 92 219 - -
Dod03g3356 366 ProSiteProfiles PRONE domain profile. 1 263 IPR005512 GO:0005085
Dod03g3356 366 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 366 - -
Dod03g3356 366 MobiDBLite consensus disorder prediction 27 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3356 Dod-Chr3 66192562 66194628 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3356 - - adu:107477244 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3356 03 66192562 66194628 Dod03g3356 03 66192562 66194628 ECH